FFCP PHASE1:Hg19::chr19:23732661..23732689,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:23732661..23732689,+ | |||
|coexpression_cluster_id=C412 | |||
|description=CAGE_peak_at_chr19:23732661..23732689,+ | |description=CAGE_peak_at_chr19:23732661..23732689,+ | ||
|id=chr19:23732661..23732689,+ | |id=chr19:23732661..23732689,+ | ||
|ontology_enrichment_celltype=CL:0000077!3.43e-18!19;CL:0000066!3.96e-15!254;CL:0000076!3.15e-12!62;CL:0002149!3.06e-10!6;CL:0002255!3.06e-10!6;CL:0000197!1.21e-09!6;CL:0000098!1.21e-09!6;CL:0002167!1.21e-09!6;CL:0002150!7.04e-07!3;CL:0000861!7.04e-07!3 | |ontology_enrichment_celltype=CL:0000077!3.43e-18!19;CL:0000066!3.96e-15!254;CL:0000076!3.15e-12!62;CL:0002149!3.06e-10!6;CL:0002255!3.06e-10!6;CL:0000197!1.21e-09!6;CL:0000098!1.21e-09!6;CL:0002167!1.21e-09!6;CL:0002150!7.04e-07!3;CL:0000861!7.04e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002097;1.44e-12;2!CL:0002149;4.36e-09;6!CL:0002255;4.36e-09;6!CL:0000174;1.17e-08;3!CL:0000077;3.33e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.29e-12,2;CL:0002149,5.43e-09,6;CL:0002255,5.43e-09,6;CL:0000174,1.09e-08,3;CL:0000077,3.76e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.44e-08;29 | |||
|ontology_enrichment_disease=DOID:14566!2.19e-23!239;DOID:162!4.27e-22!235;DOID:0050687!1.38e-21!143;DOID:305!5.23e-18!106;DOID:3001!3.06e-10!6;DOID:1749!3.00e-07!14 | |ontology_enrichment_disease=DOID:14566!2.19e-23!239;DOID:162!4.27e-22!235;DOID:0050687!1.38e-21!143;DOID:305!5.23e-18!106;DOID:3001!3.06e-10!6;DOID:1749!3.00e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3001;4.36e-09;6!DOID:6193;3.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.48e-16,235;DOID:14566,1.02e-15,239;DOID:0050687,2.84e-15,143;DOID:305,2.08e-14,106;DOID:3001,5.43e-09,6;DOID:6193,3.13e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.37e-21!9;UBERON:0001557!5.64e-11!19;UBERON:0005631!3.26e-07!14;UBERON:0000158!3.26e-07!14 | |ontology_enrichment_uberon=UBERON:0001737!4.37e-21!9;UBERON:0001557!5.64e-11!19;UBERON:0005631!3.26e-07!14;UBERON:0000158!3.26e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.92e-21;9!UBERON:0001557;5.92e-21;9!UBERON:0002369;1.17e-08;3!UBERON:0001235;1.17e-08;3!UBERON:0006858;1.17e-08;3!UBERON:0000995;6.09e-08;17!UBERON:0003975;1.74e-07;18!UBERON:0001282;3.31e-07;1!UBERON:0009842;3.31e-07;1!UBERON:0003704;3.31e-07;1!UBERON:0001171;3.31e-07;1!UBERON:0001172;3.31e-07;1!UBERON:0007195;4.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.36e-21,9;UBERON:0001557,1.15e-09,19;UBERON:0002369,1.09e-08,3;UBERON:0001235,1.09e-08,3;UBERON:0006858,1.09e-08,3;UBERON:0001282,3.32e-07,1;UBERON:0009842,3.32e-07,1;UBERON:0003704,3.32e-07,1;UBERON:0001171,3.32e-07,1;UBERON:0001172,3.32e-07,1;UBERON:0007195,4.18e-07,1 | |||
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| ||
|short_description=p@chr19:23732661..23732689,+ | |short_description=p@chr19:23732661..23732689,+ | ||
}} | }} |
Latest revision as of 05:51, 26 July 2015
Short description: | p@chr19:23732661..23732689, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:23732661..23732689, + |
Coexpression cluster: | C412_serous_breast_papillotubular_ductus_seminal_kidney_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.29e-12 | 2 |
epithelial cell of uterus | 5.43e-09 | 6 |
stromal cell of endometrium | 5.43e-09 | 6 |
steroid hormone secreting cell | 1.09e-08 | 3 |
mesothelial cell | 3.76e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.36e-21 | 9 |
upper respiratory tract | 1.15e-09 | 19 |
adrenal gland | 1.09e-08 | 3 |
adrenal cortex | 1.09e-08 | 3 |
adrenal/interrenal gland | 1.09e-08 | 3 |
intralobular bile duct | 3.32e-07 | 1 |
acinus | 3.32e-07 | 1 |
intrahepatic bile duct | 3.32e-07 | 1 |
portal lobule | 3.32e-07 | 1 |
hepatic acinus | 3.32e-07 | 1 |
stroma of bone marrow | 4.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.48e-16 | 235 |
disease of cellular proliferation | 1.02e-15 | 239 |
cell type cancer | 2.84e-15 | 143 |
carcinoma | 2.08e-14 | 106 |
female reproductive endometrioid cancer | 5.43e-09 | 6 |
epithelioid sarcoma | 3.13e-07 | 1 |