FFCP PHASE1:Hg19::chr17:56315898..56315927,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:56315898..56315927,+
|short_description=p3@LPO
|description=CAGE_peak_3_at_LPO_5end
|association_with_transcript=-24bp_to_ENST00000543544_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4025 | |EntrezGene=4025 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6678 | |HGNC=6678 | ||
|TSSclassifier=strong | |||
|UniProt=F5H386 | |UniProt=F5H386 | ||
|association_with_transcript=-24bp_to_ENST00000543544_5end | |||
|cluster_id=chr17:56315898..56315927,+ | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_3_at_LPO_5end | |||
|id=chr17:56315898..56315927,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.70e-17;1!CL:0000164;1.70e-17;1!CL:0000502;1.70e-17;1!CL:0000172;1.70e-17;1!CL:0000173;1.70e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.70e-17,1;CL:0000164,1.70e-17,1;CL:0000502,1.70e-17,1;CL:0000172,1.70e-17,1;CL:0000173,1.70e-17,1;CL:0002351,1.70e-17,1 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.66e-18;1!UBERON:0006298;3.75e-18;1!CL:0002351;1.70e-17;1!UBERON:0006965;1.71e-09;2 | |||
|ontology_enrichment_disease=DOID:3095!2.02e-09!22;DOID:2994!2.02e-09!22;DOID:171!1.59e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.70e-17;1!DOID:8692;2.53e-13;31!DOID:1240;1.83e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.70e-17,1;DOID:8692,2.43e-13,31;DOID:1240,1.29e-10,39;DOID:2531,4.03e-08,51;DOID:0060083,4.03e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001829!7.13e-08!2;UBERON:0003127!1.31e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.31e-34;2!UBERON:0001044;6.62e-26;6!UBERON:0003293;6.62e-26;6!UBERON:0003294;6.62e-26;6!UBERON:0010047;6.62e-26;6!UBERON:0003408;6.62e-26;6!UBERON:0000167;6.62e-26;6!UBERON:0001831;2.66e-18;1!UBERON:0001567;2.66e-18;1!UBERON:0001736;3.75e-18;1!UBERON:0001041;1.72e-11;14!UBERON:0004089;7.98e-10;2!UBERON:0003127;1.12e-09;2!UBERON:0000341;1.27e-09;2!UBERON:0000161;1.28e-08;19!UBERON:0000166;1.28e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.31e-34,2;UBERON:0001044,6.62e-26,6;UBERON:0003293,6.62e-26,6;UBERON:0003294,6.62e-26,6;UBERON:0010047,6.62e-26,6;UBERON:0000167,6.62e-26,6;UBERON:0001831,2.66e-18,1;UBERON:0001567,2.66e-18,1;UBERON:0008801,2.66e-18,1;UBERON:0001736,3.75e-18,1;UBERON:0006298,3.75e-18,1;UBERON:0003408,7.83e-16,10;UBERON:0004089,7.98e-10,2;UBERON:0003127,1.12e-09,2;UBERON:0000341,1.22e-09,2;UBERON:0000166,1.62e-07,22 | |||
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| ||
|short_description=p3@LPO | |||
}} | }} |
Latest revision as of 10:08, 16 September 2015
Short description: | p3@LPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LPO_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | -24bp_to_ENST00000543544_5end |
EntrezGene: | LPO |
HGNC: | 6678 |
UniProt: | F5H386 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.70e-17 | 1 |
enteroendocrine cell | 1.70e-17 | 1 |
type D enteroendocrine cell | 1.70e-17 | 1 |
somatostatin secreting cell | 1.70e-17 | 1 |
pancreatic D cell | 1.70e-17 | 1 |
progenitor cell of endocrine pancreas | 1.70e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.31e-34 | 2 |
saliva-secreting gland | 6.62e-26 | 6 |
gland of oral region | 6.62e-26 | 6 |
gland of foregut | 6.62e-26 | 6 |
oral gland | 6.62e-26 | 6 |
oral cavity | 6.62e-26 | 6 |
parotid gland | 2.66e-18 | 1 |
cheek | 2.66e-18 | 1 |
parotid gland primordium | 2.66e-18 | 1 |
submandibular gland | 3.75e-18 | 1 |
submandibular gland primordium | 3.75e-18 | 1 |
gland of gut | 7.83e-16 | 10 |
midface | 7.98e-10 | 2 |
open tracheal system trachea | 1.12e-09 | 2 |
throat | 1.22e-09 | 2 |
oral opening | 1.62e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.70e-17 | 1 |
myeloid leukemia | 2.43e-13 | 31 |
leukemia | 1.29e-10 | 39 |
hematologic cancer | 4.03e-08 | 51 |
immune system cancer | 4.03e-08 | 51 |