FFCP PHASE1:Hg19::chr1:19212524..19212526,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8659 | |EntrezGene=8659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=406 | |HGNC=406 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-411bp_to_ENST00000454547_5end | |association_with_transcript=-411bp_to_ENST00000454547_5end | ||
|cluster_id=chr1:19212524..19212526,- | |||
|description=CAGE_peak_6_at_ALDH4A1_5end | |description=CAGE_peak_6_at_ALDH4A1_5end | ||
|id=chr1:19212524..19212526,- | |id=chr1:19212524..19212526,- | ||
|ontology_enrichment_celltype=CL:0000128!1.90e-60!7;CL:0000126!1.90e-60!7;CL:0000127!1.90e-60!7;CL:0002453!1.90e-60!7;CL:0002605!1.64e-36!3;CL:0000243!8.47e-25!15;CL:0000125!8.47e-25!15;CL:0000030!8.47e-25!15;CL:0000339!8.47e-25!15;CL:0000095!3.66e-22!17;CL:0000123!3.66e-22!17;CL:0002603!7.90e-17!3;CL:0002319!1.64e-15!25;CL:0000333!1.31e-09!41;CL:0000133!6.60e-09!59;CL:0000221!2.47e-07!71 | |ontology_enrichment_celltype=CL:0000128!1.90e-60!7;CL:0000126!1.90e-60!7;CL:0000127!1.90e-60!7;CL:0002453!1.90e-60!7;CL:0002605!1.64e-36!3;CL:0000243!8.47e-25!15;CL:0000125!8.47e-25!15;CL:0000030!8.47e-25!15;CL:0000339!8.47e-25!15;CL:0000095!3.66e-22!17;CL:0000123!3.66e-22!17;CL:0002603!7.90e-17!3;CL:0002319!1.64e-15!25;CL:0000333!1.31e-09!41;CL:0000133!6.60e-09!59;CL:0000221!2.47e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002605;2.39e-66;3!CL:0000128;1.78e-29;7!CL:0000126;1.78e-29;7!CL:0000127;1.78e-29;7!CL:0000243;4.22e-13;15!CL:0000125;4.22e-13;15!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.39e-66,3;CL:0000128,1.78e-29,7;CL:0000126,1.78e-29,7;CL:0000127,1.78e-29,7;CL:0002453,1.78e-29,7;CL:0000243,4.22e-13,15;CL:0000125,4.22e-13,15;CL:0000030,4.22e-13,15;CL:0000339,4.22e-13,15;CL:0000095,6.95e-12,17;CL:0000123,6.95e-12,17;CL:0002319,8.32e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000339;4.22e-13;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;4.34e-09;25!UBERON:0000203;4.34e-09;25!UBERON:0003528;4.53e-08;34!UBERON:0002791;4.53e-08;32!UBERON:0002020;4.53e-08;34!UBERON:0001869;4.53e-08;32!UBERON:0001893;4.53e-08;34!UBERON:0000955;2.32e-07;68!UBERON:0002780;2.32e-07;41!UBERON:0001890;2.32e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.34e-09,25;UBERON:0000203,4.34e-09,25;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34 | |||
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|short_description=p6@ALDH4A1 | |short_description=p6@ALDH4A1 | ||
}} | }} |
Latest revision as of 09:24, 19 September 2015
Short description: | p6@ALDH4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ALDH4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -411bp_to_ENST00000454547_5end |
EntrezGene: | ALDH4A1 |
HGNC: | 406 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.39e-66 | 3 |
oligodendrocyte | 1.78e-29 | 7 |
macroglial cell | 1.78e-29 | 7 |
astrocyte | 1.78e-29 | 7 |
oligodendrocyte precursor cell | 1.78e-29 | 7 |
glial cell (sensu Vertebrata) | 4.22e-13 | 15 |
glial cell | 4.22e-13 | 15 |
glioblast | 4.22e-13 | 15 |
glioblast (sensu Vertebrata) | 4.22e-13 | 15 |
neuron associated cell | 6.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
neural cell | 8.32e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 4.34e-09 | 25 |
pallium | 4.34e-09 | 25 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
gray matter | 4.03e-07 | 34 |
telencephalon | 4.03e-07 | 34 |