FFCP PHASE1:Hg19::chr2:89157041..89157057,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=136bp_to_AJ294735_5end | |association_with_transcript=136bp_to_AJ294735_5end | ||
|cluster_id=chr2:89157041..89157057,- | |||
|coexpression_cluster_id=C668 | |||
|description=CAGE_peak_3_at_AJ294735_5end | |description=CAGE_peak_3_at_AJ294735_5end | ||
|id=chr2:89157041..89157057,- | |id=chr2:89157041..89157057,- | ||
|ontology_enrichment_celltype=CL:0000236!1.96e-27!14;CL:0000945!2.46e-25!24;CL:0000826!2.46e-25!24;CL:0000838!6.92e-16!52;CL:0000542!1.79e-15!53;CL:0000051!1.79e-15!53;CL:0002087!4.36e-09!119;CL:0000738!2.48e-07!140;CL:0002031!4.53e-07!124 | |ontology_enrichment_celltype=CL:0000236!1.96e-27!14;CL:0000945!2.46e-25!24;CL:0000826!2.46e-25!24;CL:0000838!6.92e-16!52;CL:0000542!1.79e-15!53;CL:0000051!1.79e-15!53;CL:0002087!4.36e-09!119;CL:0000738!2.48e-07!140;CL:0002031!4.53e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.81e-41;13!CL:0000945;4.32e-30;24!CL:0000542;6.31e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.96e-45,14;CL:0000945,4.06e-30,24;CL:0000826,4.06e-30,24;CL:0000838,2.08e-12,52;CL:0000542,4.00e-12,53;CL:0000051,4.00e-12,53;CL:0000785,7.02e-10,2;CL:0000955,7.02e-10,2;CL:0000818,7.02e-10,2;CL:0000954,7.02e-10,2;CL:0000816,7.02e-10,2;CL:0000817,7.31e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.49e-10;2!CL:0000954;6.11e-10;2!CL:0000051;6.31e-10;53!UBERON:0004872;9.96e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!1.24e-07!10 | |ontology_enrichment_disease=DOID:0060058!1.24e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.31e-34!115 | |ontology_enrichment_uberon=UBERON:0007023!1.31e-34!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.52e-11;2!UBERON:0004921;6.08e-09;33!UBERON:0001044;7.33e-08;6!UBERON:0003293;7.33e-08;6!UBERON:0003294;7.33e-08;6!UBERON:0010047;7.33e-08;6!UBERON:0003408;7.33e-08;6!UBERON:0000167;7.33e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.68e-24,114;UBERON:0001829,5.39e-11,2;UBERON:0001044,7.00e-08,6;UBERON:0003293,7.00e-08,6;UBERON:0003294,7.00e-08,6;UBERON:0010047,7.00e-08,6;UBERON:0000167,7.00e-08,6 | |||
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| ||
|short_description=p3@AJ294735 | |short_description=p3@AJ294735 | ||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p3@AJ294735 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AJ294735_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | 136bp_to_AJ294735_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.96e-45 | 14 |
lymphocyte of B lineage | 4.06e-30 | 24 |
pro-B cell | 4.06e-30 | 24 |
lymphoid lineage restricted progenitor cell | 2.08e-12 | 52 |
lymphocyte | 4.00e-12 | 53 |
common lymphoid progenitor | 4.00e-12 | 53 |
mature B cell | 7.02e-10 | 2 |
pre-B-II cell | 7.02e-10 | 2 |
transitional stage B cell | 7.02e-10 | 2 |
small pre-B-II cell | 7.02e-10 | 2 |
immature B cell | 7.02e-10 | 2 |
precursor B cell | 7.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.68e-24 | 114 |
major salivary gland | 5.39e-11 | 2 |
saliva-secreting gland | 7.00e-08 | 6 |
gland of oral region | 7.00e-08 | 6 |
gland of foregut | 7.00e-08 | 6 |
oral gland | 7.00e-08 | 6 |
oral cavity | 7.00e-08 | 6 |