FFCP PHASE1:Hg19::chr3:182129942..182129947,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:182129942..182129947,- | |||
|coexpression_cluster_id=C210 | |||
|description=CAGE_peak_at_chr3:182129942..182129947,- | |description=CAGE_peak_at_chr3:182129942..182129947,- | ||
|id=chr3:182129942..182129947,- | |id=chr3:182129942..182129947,- | ||
|ontology_enrichment_celltype=CL:0000819!1.33e-29!1;CL:0000785!1.54e-15!2;CL:0000955!1.54e-15!2;CL:0000818!1.54e-15!2;CL:0000954!1.54e-15!2;CL:0000816!1.54e-15!2;CL:0000242!2.05e-15!2;CL:0000945!1.97e-11!24;CL:0000826!1.97e-11!24;CL:0000817!8.17e-11!3;CL:0002621!1.09e-10!3;CL:0000542!4.53e-09!53;CL:0000051!4.53e-09!53;CL:0000312!6.04e-07!5 | |ontology_enrichment_celltype=CL:0000819!1.33e-29!1;CL:0000785!1.54e-15!2;CL:0000955!1.54e-15!2;CL:0000818!1.54e-15!2;CL:0000954!1.54e-15!2;CL:0000816!1.54e-15!2;CL:0000242!2.05e-15!2;CL:0000945!1.97e-11!24;CL:0000826!1.97e-11!24;CL:0000817!8.17e-11!3;CL:0002621!1.09e-10!3;CL:0000542!4.53e-09!53;CL:0000051!4.53e-09!53;CL:0000312!6.04e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000785;4.66e-66;1!CL:0000819;4.66e-66;1!CL:0000945;1.16e-25;24!CL:0000542;1.89e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,4.66e-66,1;CL:0000785,7.05e-34,2;CL:0000955,7.05e-34,2;CL:0000818,7.05e-34,2;CL:0000954,7.05e-34,2;CL:0000816,7.05e-34,2;CL:0000945,1.16e-25,24;CL:0000826,1.16e-25,24;CL:0000817,4.09e-23,3;CL:0000838,1.77e-12,52;CL:0000542,2.91e-12,53;CL:0000051,2.91e-12,53 | |||
|ontology_enrichment_development_v019=CL:0000954;7.04e-34;2!CL:0000051;1.89e-11;53 | |||
|ontology_enrichment_disease=DOID:0060073!1.33e-29!1;DOID:8675!1.33e-29!1;DOID:12603!4.20e-29!1;DOID:0060058!2.55e-26!10;DOID:4556!8.99e-11!3;DOID:2531!2.08e-09!51;DOID:0060083!2.08e-09!51;DOID:3908!5.70e-07!5 | |ontology_enrichment_disease=DOID:0060073!1.33e-29!1;DOID:8675!1.33e-29!1;DOID:12603!4.20e-29!1;DOID:0060058!2.55e-26!10;DOID:4556!8.99e-11!3;DOID:2531!2.08e-09!51;DOID:0060083!2.08e-09!51;DOID:3908!5.70e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:0060073;4.66e-66;1!DOID:8675;4.66e-66;1!DOID:0060058;1.10e-59;10!DOID:2531;5.41e-09;51!DOID:0060083;5.41e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.66e-66,1;DOID:8675,4.66e-66,1;DOID:0060058,1.10e-59,10;DOID:2531,1.06e-12,51;DOID:0060083,1.06e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.09e-10!3 | |ontology_enrichment_uberon=UBERON:0001949!1.09e-10!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr3:182129942..182129947,- | |short_description=p@chr3:182129942..182129947,- | ||
}} | }} |
Latest revision as of 18:38, 29 July 2015
Short description: | p@chr3:182129942..182129947, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:182129942..182129947, - |
Coexpression cluster: | C210_Burkitt_lymphoma_appendix_acute_diffuse_CD19_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 4.66e-66 | 1 |
mature B cell | 7.05e-34 | 2 |
pre-B-II cell | 7.05e-34 | 2 |
transitional stage B cell | 7.05e-34 | 2 |
small pre-B-II cell | 7.05e-34 | 2 |
immature B cell | 7.05e-34 | 2 |
lymphocyte of B lineage | 1.16e-25 | 24 |
pro-B cell | 1.16e-25 | 24 |
precursor B cell | 4.09e-23 | 3 |
lymphoid lineage restricted progenitor cell | 1.77e-12 | 52 |
lymphocyte | 2.91e-12 | 53 |
common lymphoid progenitor | 2.91e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.66e-66 | 1 |
lymphosarcoma | 4.66e-66 | 1 |
lymphoma | 1.10e-59 | 10 |
hematologic cancer | 1.06e-12 | 51 |
immune system cancer | 1.06e-12 | 51 |