FFCP PHASE1:Hg19::chr3:193678383..193678395,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:193678383..193678395,+ | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_at_chr3:193678383..193678395,+ | |description=CAGE_peak_at_chr3:193678383..193678395,+ | ||
|id=chr3:193678383..193678395,+ | |id=chr3:193678383..193678395,+ | ||
|ontology_enrichment_celltype=CL:0002231!8.59e-17!3;CL:0002553!2.99e-07!1 | |ontology_enrichment_celltype=CL:0002231!8.59e-17!3;CL:0002553!2.99e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002253;8.10e-26;2!CL:0002563;1.21e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,7.14e-26,2;CL:0002563,1.13e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.19e-07;31 | |||
|ontology_enrichment_disease=DOID:171!2.46e-14!10;DOID:3119!3.26e-14!14;DOID:0050619!2.09e-07!1;DOID:1357!2.09e-07!1 | |ontology_enrichment_disease=DOID:171!2.46e-14!10;DOID:3119!3.26e-14!14;DOID:0050619!2.09e-07!1;DOID:1357!2.09e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0050619;1.46e-50;1!DOID:1357;1.46e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.46e-50,1;DOID:1357,1.46e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0001046!4.01e-10!19;UBERON:0002367!4.14e-08!11;UBERON:0010147!4.14e-08!11;UBERON:0009846!4.14e-08!11;UBERON:0003353!4.14e-08!11;UBERON:0004902!4.14e-08!11;UBERON:0003820!4.14e-08!11;UBERON:0009847!4.14e-08!11;UBERON:0003937!1.93e-07!12;UBERON:0005399!1.93e-07!12;UBERON:0001764!2.09e-07!1;UBERON:0001825!2.09e-07!1;UBERON:0004913!4.25e-07!1;UBERON:0003703!4.25e-07!1;UBERON:0001174!4.25e-07!1;UBERON:0004914!4.25e-07!1;UBERON:0001000!4.51e-07!1;UBERON:0005352!4.51e-07!1;UBERON:0001052!6.77e-07!4;UBERON:0003112!8.49e-07!1;UBERON:0000032!8.49e-07!1;UBERON:0005253!8.49e-07!1;UBERON:0003128!8.49e-07!1;UBERON:0002241!8.49e-07!1;UBERON:0001703!8.49e-07!1;UBERON:0004761!8.49e-07!1;UBERON:0009617!8.49e-07!1;UBERON:0001874!9.51e-07!1 | |ontology_enrichment_uberon=UBERON:0001046!4.01e-10!19;UBERON:0002367!4.14e-08!11;UBERON:0010147!4.14e-08!11;UBERON:0009846!4.14e-08!11;UBERON:0003353!4.14e-08!11;UBERON:0004902!4.14e-08!11;UBERON:0003820!4.14e-08!11;UBERON:0009847!4.14e-08!11;UBERON:0003937!1.93e-07!12;UBERON:0005399!1.93e-07!12;UBERON:0001764!2.09e-07!1;UBERON:0001825!2.09e-07!1;UBERON:0004913!4.25e-07!1;UBERON:0003703!4.25e-07!1;UBERON:0001174!4.25e-07!1;UBERON:0004914!4.25e-07!1;UBERON:0001000!4.51e-07!1;UBERON:0005352!4.51e-07!1;UBERON:0001052!6.77e-07!4;UBERON:0003112!8.49e-07!1;UBERON:0000032!8.49e-07!1;UBERON:0005253!8.49e-07!1;UBERON:0003128!8.49e-07!1;UBERON:0002241!8.49e-07!1;UBERON:0001703!8.49e-07!1;UBERON:0004761!8.49e-07!1;UBERON:0009617!8.49e-07!1;UBERON:0001874!9.51e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.46e-50;1!UBERON:0001825;1.46e-50;1!UBERON:0001052;1.21e-13;4!UBERON:0001242;1.21e-13;4!UBERON:0002346;1.21e-13;4!UBERON:0000923;1.21e-13;4!UBERON:0010316;1.21e-13;4!UBERON:0001262;1.21e-13;4!UBERON:0004786;1.21e-13;4!UBERON:0004808;1.21e-13;4!UBERON:0001277;1.21e-13;4!UBERON:0005291;1.21e-13;4!UBERON:0002050;3.42e-11;5!UBERON:0005423;3.42e-11;5!UBERON:0004907;3.42e-11;5!UBERON:0000485;2.26e-08;7!UBERON:0003929;2.26e-08;7!UBERON:0003350;1.75e-07;8!UBERON:0001155;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.46e-50,1;UBERON:0001825,1.46e-50,1;UBERON:0001052,1.13e-13,4;UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0004907,3.26e-11,5;UBERON:0003350,1.69e-07,8;UBERON:0001155,8.37e-07,9;UBERON:0000485,8.37e-07,9 | |||
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|short_description=p@chr3:193678383..193678395,+ | |short_description=p@chr3:193678383..193678395,+ | ||
}} | }} |
Latest revision as of 19:35, 29 July 2015
Short description: | p@chr3:193678383..193678395, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:193678383..193678395, + |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 7.14e-26 | 2 |
intestinal epithelial cell | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.46e-50 | 1 |
paranasal sinus | 1.46e-50 | 1 |
rectum | 1.13e-13 | 4 |
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
lower digestive tract | 3.26e-11 | 5 |
epithelium of mucosa | 1.69e-07 | 8 |
colon | 8.37e-07 | 9 |
simple columnar epithelium | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.46e-50 | 1 |
maxillary sinus cancer | 1.46e-50 | 1 |