FFCP PHASE1:Hg19::chr17:74547267..74547290,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:74547267..74547290,-
|short_description=p8@CYGB
|description=CAGE_peak_8_at_CYGB_5end
|association_with_transcript=-99bp_to_uc002jrv.1_5end
|EntrezGene=1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114757 | |EntrezGene=114757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16505 | |HGNC=16505 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-99bp_to_uc002jrv.1_5end | |||
|cluster_id=chr17:74547267..74547290,- | |||
|description=CAGE_peak_8_at_CYGB_5end | |||
|id=chr17:74547267..74547290,- | |||
|ontology_enrichment_celltype=CL:0002076!6.16e-07!43;CL:0000223!6.84e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.78e-13;13!CL:0002368;8.69e-13;13!CL:0002559;1.05e-12;5!CL:0000244;1.86e-10;4!CL:0000731;1.86e-10;4!CL:0000362;6.65e-10;9!CL:0002202;1.44e-08;9!CL:0002632;1.44e-08;9!CL:0002076;4.16e-08;42!CL:0002159;6.76e-08;14!CL:0000346;7.23e-08;3!CL:1000428;7.23e-08;3!CL:0000307;1.32e-07;3!CL:0002328;2.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,9.48e-13,5;CL:0002368,1.19e-12,13;CL:0000136,1.65e-11,15;CL:0000223,9.07e-11,58;CL:0000244,1.36e-10,4;CL:0000731,1.36e-10,4;CL:0000362,5.04e-10,9;CL:0002076,5.42e-10,42;CL:0002202,1.56e-08,9;CL:0002632,1.56e-08,9;CL:0002159,5.07e-08,14;CL:0000346,6.40e-08,3;CL:1000428,6.40e-08,3;CL:0000068,1.69e-07,3;CL:0000069,1.69e-07,3;CL:0000307,1.69e-07,3;CL:0000377,1.69e-07,3;CL:0002321,1.85e-07,250;CL:0002328,2.43e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.32e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.65e-14!365;UBERON:0003102!1.67e-10!95;UBERON:0002100!8.46e-10!216;UBERON:0009569!3.02e-07!113;UBERON:0002199!9.20e-07!45;UBERON:0002416!9.20e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.05e-12;5!UBERON:0001003;4.54e-12;15!UBERON:0007376;4.54e-12;15!UBERON:0000486;1.48e-11;12!UBERON:0004457;5.79e-09;9!UBERON:0000042;5.79e-09;9!UBERON:0000365;2.42e-08;5!UBERON:0000412;7.23e-08;3!UBERON:0001992;7.23e-08;3!UBERON:0002097;1.17e-07;41!UBERON:0004815;2.73e-07;3!UBERON:0002031;2.73e-07;3!UBERON:0010371;4.92e-07;31!UBERON:0005910;6.27e-07;6!UBERON:0002365;8.96e-07;31!UBERON:0002330;8.96e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,9.48e-13,5;UBERON:0005086,9.48e-13,5;UBERON:0001003,3.32e-12,15;UBERON:0007376,3.32e-12,15;UBERON:0007383,3.32e-12,15;UBERON:0002199,1.91e-09,46;UBERON:0002416,1.91e-09,46;UBERON:0003102,2.90e-09,99;UBERON:0000365,1.89e-08,5;UBERON:0004457,2.15e-08,12;UBERON:0000042,2.15e-08,12;UBERON:0004119,2.36e-08,160;UBERON:0000925,2.36e-08,160;UBERON:0006595,2.36e-08,160;UBERON:0002097,4.05e-08,41;UBERON:0000412,6.40e-08,3;UBERON:0001992,6.40e-08,3;UBERON:0004815,2.43e-07,3;UBERON:0002031,2.43e-07,3;UBERON:0005910,5.12e-07,6;UBERON:0002365,5.24e-07,31;UBERON:0002330,5.24e-07,31 | |||
|phase1_expression=1.2717486548939,3.8538094300377,3.66481450649525,0,3.5756887554183,2.61701557230111,0,3.15859936713415,4.44015567939725,0.245733936501509,0,0,0,0.123766352960047,0.662794751455832,1.34465029290355,0,1.46062018077475,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,2.75826367343678,1.8072355126695,1.10926203050036,0.46480320348181,0.142169232487422,0,0,0,0,0,2.91504299417082,0.257575567634187,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0,0.0654895377488563,0.728590576585084,0,0,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0.25326102332916,0.794455084879313,0.573673241497627,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0.468642863667593,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0.413303124703062,5.94001428641027,2.71993622206413,0,0,0,0,0,0,0.30648779579902,3.00476117813194,0.113432183160021,0.179389635688862,2.77624605464138,1.27159140695737,0,1.23663035086127,0.772921620136887,1.67505170698431,0,0.194874010322397,0,1.10459878370759,0.323292113637624,0,0,0.169560592310488,1.15956511897978,0.545492241181669,2.86804595389004,0,0,0,0,0,0,1.56449532329816,2.57296375277154,4.14404764057442,6.50115099244771,7.21879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0.982827216677626,0,0,0,0,1.86575485194663,4.49607013030478,0.502644862058154,3.61094936118265,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0.839910640994298,1.55952606966625,0.447792613514241,0.290633938513962,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,10.7296933755565,0,0.531876233169741,1.04007436911366,0.514414748524284,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0.500170521059677,0,0,0,0,0,3.91229929646035,4.5481500811197,0,0,0,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0,1.24053903909388,0.767309866440312,0.561320188866147,2.30650468660262,1.02341449813341,0.64341568457443,0,0,0,0.0821271560138091,0,0,0,2.80709058424599,1.10497186723076,0.229628896329213,0.182091168006717,0.524497659837696,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,1.44257416306811,0,0,4.01985876597321,4.55042172225565,0,0.386682873168488,0,0.460511024178389,0.137836572484531,1.50388342815583,0.580066775656914,0.340906509664404,0.356128142586949,1.15699440752685,0,3.70076866234294,2.2254711788221,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0,0.632758849437452,1.14378116354295,0.255897791311334,0.42793898803392,0.318203247925937,0,1.79872457583315,1.92175920815238,0.942499218765491,0.202182481573316,0,0,1.95053495635836,0,0,0.272999822815972,0.424216295861138,0,0,0,0,1.73632660280006,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0.7133421029625,0,1.05553817648832,2.30506425071931,0,0.349934720244983,2.4055528181378,1.34060455107157,2.17781969722645,1.22386941009813,7.31859133541091,1.68471475667626,3.10401107475673,4.82419140434615,0,0,0,0,0,2.59389324477087,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,1.17206543417515,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0.969332746095218,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0.153900517007594,0.227884111694002,0.46112780877612,1.97466817701499,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.606610196826093,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,0,0.261177619741208,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.0633107959558787,0,0.160317640503067,0,0,0.432271251462318,0,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,3.86037593305396,3.95596120229599,4.38123035052202,0,0,0,0,0,0.275078873194468,0,0,0,0.121499113316049,0.670869375198532,0.0788057072991982,0.104909176269996,0.211200673038813,0.179287339332845,0,0,0,0.25426853765475,0,0.864221491201268,0,0,0,0.340776043570843,0,1.61207457045891,1.32506888912221,0.258565912723101,0.26446520348538,0,0,0.640724475406168,0.314408610199332,0,0.496166021811951,0,0,0,0,0.2506898940227,1.53172788381731,1.63936315354902,0,0,0,0.3755727921195,0,0.221858103073705,0.683060432355218,0,1.62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| 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| ||
|short_description=p8@CYGB | |||
}} | }} |
Latest revision as of 15:50, 17 September 2015
Short description: | p8@CYGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CYGB_5end |
Coexpression cluster: | NA |
Association with transcript: | -99bp_to_uc002jrv.1_5end |
EntrezGene: | CYGB |
HGNC: | 16505 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 9.48e-13 | 5 |
respiratory epithelial cell | 1.19e-12 | 13 |
fat cell | 1.65e-11 | 15 |
endodermal cell | 9.07e-11 | 58 |
transitional epithelial cell | 1.36e-10 | 4 |
urothelial cell | 1.36e-10 | 4 |
epidermal cell | 5.04e-10 | 9 |
endo-epithelial cell | 5.42e-10 | 42 |
epithelial cell of tracheobronchial tree | 1.56e-08 | 9 |
epithelial cell of lower respiratory tract | 1.56e-08 | 9 |
general ecto-epithelial cell | 5.07e-08 | 14 |
hair follicle dermal papilla cell | 6.40e-08 | 3 |
stem cell of epidermis | 6.40e-08 | 3 |
duct epithelial cell | 1.69e-07 | 3 |
branched duct epithelial cell | 1.69e-07 | 3 |
tracheal epithelial cell | 1.69e-07 | 3 |
tracheoblast | 1.69e-07 | 3 |
embryonic cell | 1.85e-07 | 250 |
bronchial epithelial cell | 2.43e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 9.48e-13 | 5 |
hair follicle placode | 9.48e-13 | 5 |
skin epidermis | 3.32e-12 | 15 |
outer epithelium | 3.32e-12 | 15 |
enveloping layer of ectoderm | 3.32e-12 | 15 |
integument | 1.91e-09 | 46 |
integumental system | 1.91e-09 | 46 |
surface structure | 2.90e-09 | 99 |
urothelium | 1.89e-08 | 5 |
cavity lining | 2.15e-08 | 12 |
serous membrane | 2.15e-08 | 12 |
endoderm-derived structure | 2.36e-08 | 160 |
endoderm | 2.36e-08 | 160 |
presumptive endoderm | 2.36e-08 | 160 |
skin of body | 4.05e-08 | 41 |
dermal papilla | 6.40e-08 | 3 |
papillary layer of dermis | 6.40e-08 | 3 |
lower respiratory tract epithelium | 2.43e-07 | 3 |
epithelium of bronchus | 2.43e-07 | 3 |
transitional epithelium | 5.12e-07 | 6 |
exocrine gland | 5.24e-07 | 31 |
exocrine system | 5.24e-07 | 31 |