FFCP PHASE1:Hg19::chr10:15139722..15139741,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10557 | |EntrezGene=10557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30329 | |HGNC=30329 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VUC3 | |UniProt=Q5VUC3 | ||
|association_with_transcript=303bp_to_ENST00000441850_5end | |association_with_transcript=303bp_to_ENST00000441850_5end | ||
|cluster_id=chr10:15139722..15139741,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_11_at_RPP38_5end | |description=CAGE_peak_11_at_RPP38_5end | ||
|id=chr10:15139722..15139741,+ | |id=chr10:15139722..15139741,+ | ||
|ontology_enrichment_celltype=CL:0000767!5.98e-11!3;CL:0000623!2.33e-10!3;CL:0000825!2.33e-10!3;CL:0002393!7.87e-09!9;CL:0002397!7.87e-09!9;CL:0000037!2.72e-08!172;CL:0000566!2.72e-08!172;CL:0002032!4.48e-08!165;CL:0000837!4.48e-08!165;CL:0000988!1.79e-07!182;CL:0000785!3.26e-07!2;CL:0000955!3.26e-07!2;CL:0000818!3.26e-07!2;CL:0000954!3.26e-07!2;CL:0000816!3.26e-07!2;CL:0000738!4.34e-07!140;CL:0000094!4.75e-07!8 | |ontology_enrichment_celltype=CL:0000767!5.98e-11!3;CL:0000623!2.33e-10!3;CL:0000825!2.33e-10!3;CL:0002393!7.87e-09!9;CL:0002397!7.87e-09!9;CL:0000037!2.72e-08!172;CL:0000566!2.72e-08!172;CL:0002032!4.48e-08!165;CL:0000837!4.48e-08!165;CL:0000988!1.79e-07!182;CL:0000785!3.26e-07!2;CL:0000955!3.26e-07!2;CL:0000818!3.26e-07!2;CL:0000954!3.26e-07!2;CL:0000816!3.26e-07!2;CL:0000738!4.34e-07!140;CL:0000094!4.75e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000771;9.86e-18;2!CL:0000094;2.01e-17;8!CL:0000081;5.76e-13;11!CL:0000767;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.27e-17,2;CL:0000094,2.19e-17,8;CL:0000081,6.11e-13,11;CL:0000767,2.59e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
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| ||
|short_description=p11@RPP38 | |short_description=p11@RPP38 | ||
}} | }} |
Latest revision as of 08:22, 17 September 2015
Short description: | p11@RPP38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RPP38_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 303bp_to_ENST00000441850_5end |
EntrezGene: | RPP38 |
HGNC: | 30329 |
UniProt: | Q5VUC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.27e-17 | 2 |
granulocyte | 2.19e-17 | 8 |
blood cell | 6.11e-13 | 11 |
basophil | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |