FFCP PHASE1:Hg19::chr11:29328382..29328391,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:29328382..29328391,+ | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr11:29328382..29328391,+ | |description=CAGE_peak_at_chr11:29328382..29328391,+ | ||
|id=chr11:29328382..29328391,+ | |id=chr11:29328382..29328391,+ | ||
|ontology_enrichment_celltype=CL:0000192!1.95e-17!42;CL:0000514!1.95e-17!42;CL:0000064!9.58e-17!3;CL:0005012!9.58e-17!3;CL:0000067!9.58e-17!3;CL:0002304!9.58e-17!3;CL:0000680!2.32e-14!57;CL:0000056!2.32e-14!57;CL:0000355!2.32e-14!57;CL:0000055!2.99e-14!180;CL:1000306!7.56e-14!4;CL:0002547!7.56e-14!4;CL:0002594!8.97e-14!4;CL:0000359!2.56e-13!32;CL:0000187!5.04e-13!54;CL:0000183!1.02e-11!59;CL:0000393!1.76e-11!60;CL:0000211!1.76e-11!60;CL:0000057!2.00e-08!75;CL:0002620!3.11e-08!23;CL:0002599!3.17e-07!1;CL:0002598!5.37e-07!1;CL:0002557!7.57e-07!1 | |ontology_enrichment_celltype=CL:0000192!1.95e-17!42;CL:0000514!1.95e-17!42;CL:0000064!9.58e-17!3;CL:0005012!9.58e-17!3;CL:0000067!9.58e-17!3;CL:0002304!9.58e-17!3;CL:0000680!2.32e-14!57;CL:0000056!2.32e-14!57;CL:0000355!2.32e-14!57;CL:0000055!2.99e-14!180;CL:1000306!7.56e-14!4;CL:0002547!7.56e-14!4;CL:0002594!8.97e-14!4;CL:0000359!2.56e-13!32;CL:0000187!5.04e-13!54;CL:0000183!1.02e-11!59;CL:0000393!1.76e-11!60;CL:0000211!1.76e-11!60;CL:0000057!2.00e-08!75;CL:0002620!3.11e-08!23;CL:0002599!3.17e-07!1;CL:0002598!5.37e-07!1;CL:0002557!7.57e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002593;5.96e-34;2!CL:1000306;7.35e-18;4!CL:0002547;7.35e-18;4!CL:0002595;1.71e-14;5!CL:0000359;6.52e-10;32!CL:0002539;6.34e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,7.05e-34,2;CL:1000306,7.35e-18,4;CL:0002547,7.35e-18,4;CL:0002595,1.83e-14,5;CL:0000359,2.31e-09,32;CL:0002539,6.13e-08,10;CL:0000192,3.05e-07,43;CL:0000514,3.05e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002456;5.96e-34;2!UBERON:0004797;7.35e-18;4!UBERON:0000415;7.35e-18;4!UBERON:0007240;7.35e-18;4!UBERON:0005742;7.35e-18;4!UBERON:0005734;7.35e-18;4!UBERON:0004664;7.35e-18;4!UBERON:0004663;7.35e-18;4!UBERON:0004573;1.59e-17;33!UBERON:0004571;1.59e-17;33!UBERON:0003834;1.71e-14;5!UBERON:0001533;1.71e-14;5!UBERON:0000947;1.05e-13;21!UBERON:0010191;1.05e-13;21!UBERON:0001637;6.91e-12;42!UBERON:0003509;6.91e-12;42!UBERON:0004572;6.91e-12;42!UBERON:0003513;9.43e-11;7!UBERON:0004237;6.34e-08;10!UBERON:0004695;6.34e-08;10!UBERON:0002111;6.34e-08;10!UBERON:0004178;6.34e-08;10!UBERON:0007500;7.28e-07;56!UBERON:0001981;7.28e-07;56!UBERON:0004537;7.28e-07;56 | |||
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|short_description=p@chr11:29328382..29328391,+ | |short_description=p@chr11:29328382..29328391,+ | ||
}} | }} |
Latest revision as of 21:23, 23 July 2015
Short description: | p@chr11:29328382..29328391, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:29328382..29328391, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 7.05e-34 | 2 |
fibroblast of tunica adventitia of artery | 7.35e-18 | 4 |
fibroblast of the aortic adventitia | 7.35e-18 | 4 |
smooth muscle cell of the subclavian artery | 1.83e-14 | 5 |
vascular associated smooth muscle cell | 2.31e-09 | 32 |
aortic smooth muscle cell | 6.13e-08 | 10 |
smooth muscle cell | 3.05e-07 | 43 |
smooth muscle myoblast | 3.05e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 7.05e-34 | 2 |
systemic artery | 5.33e-19 | 33 |
systemic arterial system | 5.33e-19 | 33 |
artery wall | 7.35e-18 | 4 |
tunica adventitia of artery | 7.35e-18 | 4 |
adventitia | 7.35e-18 | 4 |
tunica adventitia of blood vessel | 7.35e-18 | 4 |
aorta tunica adventitia | 7.35e-18 | 4 |
aorta wall | 7.35e-18 | 4 |
artery | 3.52e-15 | 42 |
arterial blood vessel | 3.52e-15 | 42 |
arterial system | 3.52e-15 | 42 |
thoracic segment blood vessel | 1.83e-14 | 5 |
subclavian artery | 1.83e-14 | 5 |
aorta | 1.02e-13 | 21 |
aortic system | 1.02e-13 | 21 |
epithelial tube open at both ends | 3.99e-11 | 59 |
blood vessel | 3.99e-11 | 59 |
blood vasculature | 3.99e-11 | 59 |
vascular cord | 3.99e-11 | 59 |
blood vessel layer | 8.16e-11 | 7 |
trunk blood vessel | 9.89e-11 | 7 |
vessel | 8.58e-10 | 68 |
vasculature | 1.14e-08 | 78 |
vascular system | 1.14e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |
blood vessel smooth muscle | 6.13e-08 | 10 |
arterial system smooth muscle | 6.13e-08 | 10 |
artery smooth muscle tissue | 6.13e-08 | 10 |
aorta smooth muscle tissue | 6.13e-08 | 10 |