FFCP PHASE1:Hg19::chr11:32851437..32851446,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79056 | |EntrezGene=79056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30799 | |HGNC=30799 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZD6 | |UniProt=Q9BZD6 | ||
|association_with_transcript=-34bp_to_NM_024081_5end | |association_with_transcript=-34bp_to_NM_024081_5end | ||
|cluster_id=chr11:32851437..32851446,+ | |||
|coexpression_cluster_id=C3144 | |coexpression_cluster_id=C3144 | ||
|description=CAGE_peak_5_at_PRRG4_5end | |description=CAGE_peak_5_at_PRRG4_5end | ||
|id=chr11:32851437..32851446,+ | |id=chr11:32851437..32851446,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.23e-20!254;CL:0002076!1.45e-19!43;CL:0000223!1.00e-16!59;CL:0002251!1.05e-14!21;CL:0002159!4.05e-08!13;CL:0000622!4.29e-07!5 | |ontology_enrichment_celltype=CL:0000066!7.23e-20!254;CL:0002076!1.45e-19!43;CL:0000223!1.00e-16!59;CL:0002251!1.05e-14!21;CL:0002159!4.05e-08!13;CL:0000622!4.29e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002166;3.19e-19;3!CL:0000317;7.82e-14;2!CL:1000448;7.82e-14;2!CL:0002308;7.82e-14;2!CL:0002140;7.82e-14;2!CL:0000622;5.20e-12;5!CL:0002159;4.55e-11;14!CL:0002251;4.67e-11;20!CL:0000154;4.32e-10;6!CL:0002336;5.57e-08;1!CL:0002261;5.57e-08;1!CL:0002170;5.57e-08;1!CL:0000150;7.11e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.88e-19,3;CL:0000317,7.14e-14,2;CL:1000448,7.14e-14,2;CL:0002308,7.14e-14,2;CL:0002140,7.14e-14,2;CL:0000622,4.01e-12,5;CL:0002159,3.68e-11,14;CL:0002251,3.95e-11,20;CL:0000154,3.48e-10,6;CL:0000223,2.76e-09,58;CL:0002336,6.37e-08,1;CL:0002261,6.37e-08,1;CL:0002170,6.37e-08,1;CL:0000150,6.18e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.57e-08;1!UBERON:0003124;1.53e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.94e-13!106;DOID:0050687!3.08e-09!143;DOID:1749!3.43e-08!14 | |ontology_enrichment_disease=DOID:305!1.94e-13!106;DOID:0050687!3.08e-09!143;DOID:1749!3.43e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.53e-07;1!DOID:3149;1.53e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.17e-07,1;DOID:3149,3.17e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.97e-23!169;UBERON:0000925!6.97e-23!169;UBERON:0006595!6.97e-23!169;UBERON:0001007!1.52e-17!155;UBERON:0001555!1.52e-17!155;UBERON:0007026!1.52e-17!155;UBERON:0001004!6.42e-15!72;UBERON:0004921!3.35e-13!129;UBERON:0004185!3.35e-13!129;UBERON:0005911!4.82e-11!82;UBERON:0000077!5.46e-11!130;UBERON:0000065!1.24e-10!53;UBERON:0000161!3.44e-10!35;UBERON:0005631!1.84e-08!14;UBERON:0000158!1.84e-08!14;UBERON:0000166!1.98e-08!21;UBERON:0000344!3.11e-08!12;UBERON:0001041!4.20e-08!98;UBERON:0003729!8.13e-08!5;UBERON:0005153!2.12e-07!37;UBERON:0000072!3.55e-07!46 | |ontology_enrichment_uberon=UBERON:0004119!6.97e-23!169;UBERON:0000925!6.97e-23!169;UBERON:0006595!6.97e-23!169;UBERON:0001007!1.52e-17!155;UBERON:0001555!1.52e-17!155;UBERON:0007026!1.52e-17!155;UBERON:0001004!6.42e-15!72;UBERON:0004921!3.35e-13!129;UBERON:0004185!3.35e-13!129;UBERON:0005911!4.82e-11!82;UBERON:0000077!5.46e-11!130;UBERON:0000065!1.24e-10!53;UBERON:0000161!3.44e-10!35;UBERON:0005631!1.84e-08!14;UBERON:0000158!1.84e-08!14;UBERON:0000166!1.98e-08!21;UBERON:0000344!3.11e-08!12;UBERON:0001041!4.20e-08!98;UBERON:0003729!8.13e-08!5;UBERON:0005153!2.12e-07!37;UBERON:0000072!3.55e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.45e-14;4!UBERON:0008895;1.45e-14;4!UBERON:0006562;6.04e-14;2!UBERON:0002419;7.82e-14;2!UBERON:0007771;7.82e-14;2!UBERON:0003297;7.82e-14;2!UBERON:0001821;7.82e-14;2!UBERON:0003487;7.82e-14;2!UBERON:0001820;7.82e-14;2!UBERON:0011159;9.27e-12;5!UBERON:0000974;4.32e-10;6!UBERON:0000161;4.26e-08;19!UBERON:0000166;4.26e-08;19!UBERON:0003729;4.57e-08;13!UBERON:0000344;8.87e-08;20!UBERON:0000165;1.25e-07;28!UBERON:0002372;1.53e-07;1!UBERON:0004913;1.53e-07;1!UBERON:0003703;1.53e-07;1!UBERON:0001961;1.53e-07;1!UBERON:0001744;1.53e-07;1!UBERON:0001042;1.53e-07;1!UBERON:0001735;1.53e-07;1!UBERON:0001174;1.53e-07;1!UBERON:0004914;1.53e-07;1!UBERON:0003343;2.43e-07;4!UBERON:0004785;2.43e-07;4!UBERON:0001987;3.94e-07;4!UBERON:0002365;4.40e-07;31!UBERON:0002330;4.40e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,9.81e-15,4;UBERON:0008895,9.81e-15,4;UBERON:0002419,7.14e-14,2;UBERON:0007771,7.14e-14,2;UBERON:0003297,7.14e-14,2;UBERON:0001821,7.14e-14,2;UBERON:0003487,7.14e-14,2;UBERON:0001820,7.14e-14,2;UBERON:0005089,7.14e-14,2;UBERON:0005088,7.14e-14,2;UBERON:0011159,6.79e-12,5;UBERON:0010188,5.38e-10,6;UBERON:0002539,5.38e-10,6;UBERON:0008816,5.38e-10,6;UBERON:0000153,2.09e-08,62;UBERON:0007811,2.09e-08,62;UBERON:0003729,4.26e-08,13;UBERON:0000344,8.96e-08,20;UBERON:0000033,1.08e-07,56;UBERON:0004913,1.48e-07,1;UBERON:0003703,1.48e-07,1;UBERON:0001174,1.48e-07,1;UBERON:0004914,1.48e-07,1;UBERON:0005631,1.68e-07,14;UBERON:0000158,1.68e-07,14;UBERON:0002372,2.04e-07,1;UBERON:0001961,2.04e-07,1;UBERON:0001744,2.04e-07,1;UBERON:0001735,2.04e-07,1;UBERON:0000165,2.26e-07,29;UBERON:0000930,2.26e-07,29;UBERON:0003343,2.47e-07,4;UBERON:0004785,2.47e-07,4;UBERON:0001987,2.80e-07,4;UBERON:0004340,2.80e-07,4;UBERON:0000166,5.35e-07,22;UBERON:0003102,6.94e-07,99;UBERON:0002365,7.60e-07,31;UBERON:0002330,7.60e-07,31 | |||
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|short_description=p5@PRRG4 | |short_description=p5@PRRG4 | ||
}} | }} |
Latest revision as of 15:57, 17 September 2015
Short description: | p5@PRRG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRRG4_5end |
Coexpression cluster: | C3144_cervical_pharyngeal_oral_amniotic_keratoacanthoma_esophagus_squamous |
Association with transcript: | -34bp_to_NM_024081_5end |
EntrezGene: | PRRG4 |
HGNC: | 30799 |
UniProt: | Q9BZD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.88e-19 | 3 |
sebum secreting cell | 7.14e-14 | 2 |
epithelial cell of sweat gland | 7.14e-14 | 2 |
epithelial cell of skin gland | 7.14e-14 | 2 |
acinar cell of sebaceous gland | 7.14e-14 | 2 |
acinar cell | 4.01e-12 | 5 |
general ecto-epithelial cell | 3.68e-11 | 14 |
epithelial cell of alimentary canal | 3.95e-11 | 20 |
protein secreting cell | 3.48e-10 | 6 |
endodermal cell | 2.76e-09 | 58 |
buccal mucosa cell | 6.37e-08 | 1 |
endothelial cell of viscerocranial mucosa | 6.37e-08 | 1 |
keratinized cell of the oral mucosa | 6.37e-08 | 1 |
glandular epithelial cell | 6.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.17e-07 | 1 |
keratoacanthoma | 3.17e-07 | 1 |