FFCP PHASE1:Hg19::chr11:62066545..62066576,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404552 | |EntrezGene=404552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31748 | |HGNC=31748 | ||
|TSSclassifier=strong | |||
|UniProt=Q6XE38 | |UniProt=Q6XE38 | ||
|association_with_transcript=-9bp_to_ENST00000358585,NM_206998,uc001ntd.1_5end | |association_with_transcript=-9bp_to_ENST00000358585,NM_206998,uc001ntd.1_5end | ||
|cluster_id=chr11:62066545..62066576,- | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_1_at_SCGB1D4_5end | |description=CAGE_peak_1_at_SCGB1D4_5end | ||
|id=chr11:62066545..62066576,- | |id=chr11:62066545..62066576,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.11e-21;2!UBERON:0005795;8.46e-17;10 | |||
|ontology_enrichment_disease=DOID:4468!7.52e-08!2 | |ontology_enrichment_disease=DOID:4468!7.52e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!2.83e-30!11;UBERON:0006947!3.52e-19!3;UBERON:0004054!3.52e-19!3;UBERON:0003133!4.32e-17!48;UBERON:0000473!1.90e-15!8;UBERON:0003101!3.56e-15!22;UBERON:0000079!3.56e-15!22;UBERON:0001301!4.73e-15!1;UBERON:0001000!5.42e-15!1;UBERON:0005352!5.42e-15!1;UBERON:0006834!8.17e-15!1;UBERON:0005904!1.23e-14!4;UBERON:0002370!6.55e-14!4;UBERON:0005058!6.55e-14!4;UBERON:0009113!6.55e-14!4;UBERON:0003295!6.55e-14!4;UBERON:0005562!6.55e-14!4;UBERON:0005156!9.06e-14!59;UBERON:0000990!9.06e-14!59;UBERON:0000991!2.17e-10!21;UBERON:0009196!2.17e-10!21;UBERON:0009117!2.17e-10!21;UBERON:0005564!2.17e-10!21;UBERON:0004176!6.27e-10!22;UBERON:0003351!1.37e-09!6;UBERON:0004175!6.18e-09!25;UBERON:0004177!2.40e-08!7 | |ontology_enrichment_uberon=UBERON:0003135!2.83e-30!11;UBERON:0006947!3.52e-19!3;UBERON:0004054!3.52e-19!3;UBERON:0003133!4.32e-17!48;UBERON:0000473!1.90e-15!8;UBERON:0003101!3.56e-15!22;UBERON:0000079!3.56e-15!22;UBERON:0001301!4.73e-15!1;UBERON:0001000!5.42e-15!1;UBERON:0005352!5.42e-15!1;UBERON:0006834!8.17e-15!1;UBERON:0005904!1.23e-14!4;UBERON:0002370!6.55e-14!4;UBERON:0005058!6.55e-14!4;UBERON:0009113!6.55e-14!4;UBERON:0003295!6.55e-14!4;UBERON:0005562!6.55e-14!4;UBERON:0005156!9.06e-14!59;UBERON:0000990!9.06e-14!59;UBERON:0000991!2.17e-10!21;UBERON:0009196!2.17e-10!21;UBERON:0009117!2.17e-10!21;UBERON:0005564!2.17e-10!21;UBERON:0004176!6.27e-10!22;UBERON:0003351!1.37e-09!6;UBERON:0004175!6.18e-09!25;UBERON:0004177!2.40e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.47e-53;3!UBERON:0004054;1.47e-53;3!UBERON:0001301;6.62e-41;1!UBERON:0005795;1.21e-40;1!UBERON:0001000;1.21e-40;1!UBERON:0005352;1.21e-40;1!UBERON:0005904;1.64e-40;4!UBERON:0006834;3.30e-40;1!UBERON:0004175;9.04e-18;21!UBERON:0000058;6.14e-17;10!UBERON:0003135;1.68e-15;11!UBERON:0002050;2.86e-09;5!UBERON:0005423;2.86e-09;5!UBERON:0003133;5.59e-09;44!UBERON:0003101;2.88e-08;22!UBERON:0000079;2.88e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.28e-53,3;UBERON:0004054,1.28e-53,3;UBERON:0001301,6.62e-41,1;UBERON:0001000,9.91e-41,1;UBERON:0005352,9.91e-41,1;UBERON:0005904,1.48e-40,4;UBERON:0006834,3.30e-40,1;UBERON:0003135,1.62e-15,11;UBERON:0004175,4.40e-15,25;UBERON:0003133,7.05e-14,48;UBERON:0005156,2.01e-11,59;UBERON:0000990,2.01e-11,59;UBERON:0000058,1.99e-09,19;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0005795,3.39e-08,22 | |||
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|short_description=p1@SCGB1D4 | |short_description=p1@SCGB1D4 | ||
}} | }} |
Latest revision as of 18:46, 18 September 2015
Short description: | p1@SCGB1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCGB1D4_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -9bp_to_ENST00000358585, NM_206998, uc001ntd.1_5end |
EntrezGene: | SCGB1D4 |
HGNC: | 31748 |
UniProt: | Q6XE38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.28e-53 | 3 |
internal male genitalia | 1.28e-53 | 3 |
epididymis | 6.62e-41 | 1 |
vas deferens | 9.91e-41 | 1 |
spermatic cord | 9.91e-41 | 1 |
duct of male reproductive system | 1.48e-40 | 4 |
uterus or analog | 3.30e-40 | 1 |
male reproductive organ | 1.62e-15 | 11 |
internal genitalia | 4.40e-15 | 25 |
reproductive organ | 7.05e-14 | 48 |
reproductive structure | 2.01e-11 | 59 |
reproductive system | 2.01e-11 | 59 |
duct | 1.99e-09 | 19 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
embryonic uterus | 3.39e-08 | 22 |