FFCP PHASE1:Hg19::chr11:7618437..7618448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8495 | |EntrezGene=8495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9250 | |HGNC=9250 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000529321_5end | |association_with_transcript=-19bp_to_ENST00000529321_5end | ||
|cluster_id=chr11:7618437..7618448,+ | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_20_at_PPFIBP2_5end | |description=CAGE_peak_20_at_PPFIBP2_5end | ||
|id=chr11:7618437..7618448,+ | |id=chr11:7618437..7618448,+ | ||
|ontology_enrichment_celltype=CL:0000622!8.20e-11!5;CL:0000154!5.28e-09!6;CL:0002327!1.42e-07!4;CL:0000317!1.71e-07!2;CL:1000448!1.71e-07!2;CL:0002308!1.71e-07!2;CL:0002140!1.71e-07!2;CL:0000575!3.86e-07!2 | |ontology_enrichment_celltype=CL:0000622!8.20e-11!5;CL:0000154!5.28e-09!6;CL:0002327!1.42e-07!4;CL:0000317!1.71e-07!2;CL:1000448!1.71e-07!2;CL:0002308!1.71e-07!2;CL:0002140!1.71e-07!2;CL:0000575!3.86e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000313;2.21e-15;1!CL:0000159;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.17e-15,1;CL:0000159,2.87e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.56e-16;1!UBERON:0000358;9.98e-16;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;2.21e-15;1!DOID:10165;2.21e-15;1!DOID:3151;2.21e-15;1!DOID:2152;2.21e-15;1!DOID:1798;2.21e-15;1!DOID:3149;2.21e-15;1!DOID:5093;2.66e-15;4!DOID:1612;2.66e-15;4!DOID:3451;2.40e-08;2!DOID:4159;2.40e-08;2!DOID:0060122;2.40e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.54e-15,1;DOID:10165,1.54e-15,1;DOID:1798,1.54e-15,1;DOID:5093,2.76e-15,4;DOID:1612,2.76e-15,4;DOID:2152,3.17e-15,1;DOID:3151,3.66e-15,1;DOID:3149,3.66e-15,1;DOID:3451,3.08e-08,2;DOID:4159,3.08e-08,2;DOID:0060122,3.08e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004911;2.21e-15;1!UBERON:0001044;1.50e-10;6!UBERON:0003293;1.50e-10;6!UBERON:0003294;1.50e-10;6!UBERON:0010047;1.50e-10;6!UBERON:0003408;1.50e-10;6!UBERON:0000167;1.50e-10;6!UBERON:0003127;2.40e-08;2!UBERON:0004909;2.40e-08;2!UBERON:0000161;2.04e-07;19!UBERON:0000166;2.04e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,3.17e-15,1;UBERON:0001044,1.57e-10,6;UBERON:0003293,1.57e-10,6;UBERON:0003294,1.57e-10,6;UBERON:0010047,1.57e-10,6;UBERON:0000167,1.57e-10,6;UBERON:0003127,1.86e-08,2;UBERON:0004909,2.87e-08,2 | |||
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| ||
|short_description=p20@PPFIBP2 | |short_description=p20@PPFIBP2 | ||
}} | }} |
Latest revision as of 07:32, 20 September 2015
Short description: | p20@PPFIBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PPFIBP2_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -19bp_to_ENST00000529321_5end |
EntrezGene: | PPFIBP2 |
HGNC: | 9250 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.17e-15 | 1 |
seromucus secreting cell | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 3.17e-15 | 1 |
saliva-secreting gland | 1.57e-10 | 6 |
gland of oral region | 1.57e-10 | 6 |
gland of foregut | 1.57e-10 | 6 |
oral gland | 1.57e-10 | 6 |
oral cavity | 1.57e-10 | 6 |
open tracheal system trachea | 1.86e-08 | 2 |
epithelium of gonad | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.54e-15 | 1 |
endocrine pancreas cancer | 1.54e-15 | 1 |
pancreatic endocrine carcinoma | 1.54e-15 | 1 |
thoracic cancer | 2.76e-15 | 4 |
breast cancer | 2.76e-15 | 4 |
ovary epithelial cancer | 3.17e-15 | 1 |
skin squamous cell carcinoma | 3.66e-15 | 1 |
keratoacanthoma | 3.66e-15 | 1 |
skin carcinoma | 3.08e-08 | 2 |
skin cancer | 3.08e-08 | 2 |
integumentary system cancer | 3.08e-08 | 2 |