FFCP PHASE1:Hg19::chr12:11709356..11709367,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:11709356..11709367,+ | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_at_chr12:11709356..11709367,+ | |description=CAGE_peak_at_chr12:11709356..11709367,+ | ||
|id=chr12:11709356..11709367,+ | |id=chr12:11709356..11709367,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.83e-12!24;CL:0000826!2.83e-12!24;CL:0000946!5.79e-10!1;CL:0000786!5.79e-10!1;CL:0000980!5.79e-10!1;CL:0000838!2.41e-09!52;CL:0000542!3.79e-09!53;CL:0000051!3.79e-09!53 | |ontology_enrichment_celltype=CL:0000945!2.83e-12!24;CL:0000826!2.83e-12!24;CL:0000946!5.79e-10!1;CL:0000786!5.79e-10!1;CL:0000980!5.79e-10!1;CL:0000838!2.41e-09!52;CL:0000542!3.79e-09!53;CL:0000051!3.79e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000946;5.97e-34;1!CL:0000786;5.97e-34;1!CL:0000945;1.77e-22;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,9.85e-34,1;CL:0000786,9.85e-34,1;CL:0000980,9.85e-34,1;CL:0000945,1.72e-22,24;CL:0000826,1.72e-22,24;CL:0000785,1.27e-17,2;CL:0000955,1.27e-17,2;CL:0000818,1.27e-17,2;CL:0000954,1.27e-17,2;CL:0000816,1.27e-17,2;CL:0000817,3.24e-12,3;CL:0000838,1.01e-10,52;CL:0000542,1.57e-10,53;CL:0000051,1.57e-10,53 | |||
|ontology_enrichment_development_v019=UBERON:0004872;6.79e-20;7!CL:0000954;9.86e-18;2!UBERON:0006965;9.86e-18;2 | |||
|ontology_enrichment_disease=DOID:2355!1.62e-09!1;DOID:0060058!3.55e-08!10 | |ontology_enrichment_disease=DOID:2355!1.62e-09!1;DOID:0060058!3.55e-08!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001875!1.34e-17!2;UBERON:0006514!1.34e-17!2;UBERON:0009663!3.42e-11!7;UBERON:0000989!7.50e-10!1;UBERON:0008811!7.50e-10!1;UBERON:0006258!7.50e-10!1;UBERON:0005876!7.50e-10!1;UBERON:0004874!7.50e-10!1;UBERON:0002146!9.70e-10!1;UBERON:0005623!9.70e-10!1;UBERON:0001301!1.48e-09!1;UBERON:0002038!1.76e-09!1;UBERON:0009661!1.76e-09!1;UBERON:0002308!8.08e-09!9;UBERON:0002420!8.08e-09!9;UBERON:0000125!8.08e-09!9;UBERON:0007245!8.08e-09!9;UBERON:0010009!8.08e-09!9;UBERON:0010011!8.08e-09!9;UBERON:0000454!8.08e-09!9;UBERON:0001872!1.89e-07!5;UBERON:0003135!2.72e-07!11;UBERON:0007023!6.53e-07!115 | |ontology_enrichment_uberon=UBERON:0001875!1.34e-17!2;UBERON:0006514!1.34e-17!2;UBERON:0009663!3.42e-11!7;UBERON:0000989!7.50e-10!1;UBERON:0008811!7.50e-10!1;UBERON:0006258!7.50e-10!1;UBERON:0005876!7.50e-10!1;UBERON:0004874!7.50e-10!1;UBERON:0002146!9.70e-10!1;UBERON:0005623!9.70e-10!1;UBERON:0001301!1.48e-09!1;UBERON:0002038!1.76e-09!1;UBERON:0009661!1.76e-09!1;UBERON:0002308!8.08e-09!9;UBERON:0002420!8.08e-09!9;UBERON:0000125!8.08e-09!9;UBERON:0007245!8.08e-09!9;UBERON:0010009!8.08e-09!9;UBERON:0010011!8.08e-09!9;UBERON:0000454!8.08e-09!9;UBERON:0001872!1.89e-07!5;UBERON:0003135!2.72e-07!11;UBERON:0007023!6.53e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.85e-12;3!UBERON:0004177;5.35e-08;5!UBERON:0005057;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.85e-12,3;UBERON:0004854,1.85e-12,3;UBERON:0009034,1.85e-12,3;UBERON:0002095,1.85e-12,3;UBERON:0004782,1.85e-12,3;UBERON:0003281,1.85e-12,3;UBERON:0009664,1.85e-12,3;UBERON:0002296,1.85e-12,3;UBERON:0005602,1.85e-12,3;UBERON:0001179,1.85e-12,3;UBERON:0006293,1.85e-12,3 | |||
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|short_description=p@chr12:11709356..11709367,+ | |short_description=p@chr12:11709356..11709367,+ | ||
}} | }} |
Latest revision as of 05:25, 24 July 2015
Short description: | p@chr12:11709356..11709367, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:11709356..11709367, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 9.85e-34 | 1 |
plasma cell | 9.85e-34 | 1 |
plasmablast | 9.85e-34 | 1 |
lymphocyte of B lineage | 1.72e-22 | 24 |
pro-B cell | 1.72e-22 | 24 |
mature B cell | 1.27e-17 | 2 |
pre-B-II cell | 1.27e-17 | 2 |
transitional stage B cell | 1.27e-17 | 2 |
small pre-B-II cell | 1.27e-17 | 2 |
immature B cell | 1.27e-17 | 2 |
precursor B cell | 3.24e-12 | 3 |
lymphoid lineage restricted progenitor cell | 1.01e-10 | 52 |
lymphocyte | 1.57e-10 | 53 |
common lymphoid progenitor | 1.57e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.85e-12 | 3 |
gastrointestinal system mesentery | 1.85e-12 | 3 |
stomach region | 1.85e-12 | 3 |
mesentery | 1.85e-12 | 3 |
gastrointestinal system serosa | 1.85e-12 | 3 |
mesentery of stomach | 1.85e-12 | 3 |
gut mesentery | 1.85e-12 | 3 |
dorsal mesentery | 1.85e-12 | 3 |
dorsal mesogastrium | 1.85e-12 | 3 |
peritoneal cavity | 1.85e-12 | 3 |
spleen primordium | 1.85e-12 | 3 |