FFCP PHASE1:Hg19::chr12:56347996..56348011,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-112bp_to_ENST00000554053_5end | |association_with_transcript=-112bp_to_ENST00000554053_5end | ||
|cluster_id=chr12:56347996..56348011,- | |||
|coexpression_cluster_id=C206 | |coexpression_cluster_id=C206 | ||
|description=CAGE_peak_2_at_ENST00000554053_5end | |description=CAGE_peak_2_at_ENST00000554053_5end | ||
|id=chr12:56347996..56348011,- | |id=chr12:56347996..56348011,- | ||
|ontology_enrichment_celltype=CL:0000148!1.40e-74!10;CL:0000541!1.40e-74!10;CL:0000147!5.42e-67!14;CL:0000710!5.50e-37!20;CL:0002567!2.08e-36!3;CL:0000075!2.80e-34!27;CL:0000325!6.45e-29!39;CL:0002077!3.93e-22!33;CL:0000333!8.40e-17!41;CL:0000133!1.19e-14!59;CL:0002566!3.76e-13!1;CL:0000149!8.17e-13!4;CL:0000221!4.56e-12!71;CL:0002322!3.76e-10!5 | |ontology_enrichment_celltype=CL:0000148!1.40e-74!10;CL:0000541!1.40e-74!10;CL:0000147!5.42e-67!14;CL:0000710!5.50e-37!20;CL:0002567!2.08e-36!3;CL:0000075!2.80e-34!27;CL:0000325!6.45e-29!39;CL:0002077!3.93e-22!33;CL:0000333!8.40e-17!41;CL:0000133!1.19e-14!59;CL:0002566!3.76e-13!1;CL:0000149!8.17e-13!4;CL:0000221!4.56e-12!71;CL:0002322!3.76e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.49e-63;10!CL:0002567;2.87e-53;3!CL:0000147;1.98e-45;14!CL:0000710;4.31e-32;20!CL:0000075;5.28e-24;27!CL:0002077;1.95e-17;34!CL:0000149;3.10e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.49e-63,10;CL:0000541,3.49e-63,10;CL:0002567,2.87e-53,3;CL:0000147,1.98e-45,14;CL:0000710,4.31e-32,20;CL:0000075,5.28e-24,27;CL:0002077,3.10e-19,34;CL:0000333,2.26e-15,41;CL:0000149,3.10e-11,4;CL:0000133,4.78e-11,59;CL:0000221,3.20e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!8.00e-25!2 | |ontology_enrichment_disease=DOID:1909!8.00e-25!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;3.11e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.11e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.98e-10!5;UBERON:0005388!2.98e-10!5;UBERON:0001802!2.98e-10!5 | |ontology_enrichment_uberon=UBERON:0000966!2.98e-10!5;UBERON:0005388!2.98e-10!5;UBERON:0001802!2.98e-10!5 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@ENST00000554053 | |short_description=p2@ENST00000554053 | ||
}} | }} |
Latest revision as of 10:15, 24 July 2015
Short description: | p2@ENST00000554053 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000554053_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | -112bp_to_ENST00000554053_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.49e-63 | 10 |
melanoblast | 3.49e-63 | 10 |
light melanocyte | 2.87e-53 | 3 |
pigment cell | 1.98e-45 | 14 |
neurecto-epithelial cell | 4.31e-32 | 20 |
columnar/cuboidal epithelial cell | 5.28e-24 | 27 |
ecto-epithelial cell | 3.10e-19 | 34 |
migratory neural crest cell | 2.26e-15 | 41 |
visual pigment cell | 3.10e-11 | 4 |
neurectodermal cell | 4.78e-11 | 59 |
ectodermal cell | 3.20e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.11e-21 | 2 |