FFCP PHASE1:Hg19::chr12:56351862..56351871,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:56351862..56351871,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_at_chr12:56351862..56351871,- | |description=CAGE_peak_at_chr12:56351862..56351871,- | ||
|id=chr12:56351862..56351871,- | |id=chr12:56351862..56351871,- | ||
|ontology_enrichment_celltype=CL:0000148!5.11e-79!10;CL:0000541!5.11e-79!10;CL:0000147!2.67e-56!14;CL:0000710!3.08e-39!20;CL:0002567!1.62e-38!3;CL:0000075!6.69e-29!27;CL:0002077!1.60e-23!33;CL:0000325!8.58e-20!39;CL:0000333!6.98e-18!41;CL:0000133!1.31e-15!59;CL:0002566!6.65e-14!1;CL:0000221!7.03e-13!71;CL:0002322!1.23e-10!5 | |ontology_enrichment_celltype=CL:0000148!5.11e-79!10;CL:0000541!5.11e-79!10;CL:0000147!2.67e-56!14;CL:0000710!3.08e-39!20;CL:0002567!1.62e-38!3;CL:0000075!6.69e-29!27;CL:0002077!1.60e-23!33;CL:0000325!8.58e-20!39;CL:0000333!6.98e-18!41;CL:0000133!1.31e-15!59;CL:0002566!6.65e-14!1;CL:0000221!7.03e-13!71;CL:0002322!1.23e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.03e-82;10!CL:0000147;7.70e-59;14!CL:0002567;4.99e-45;3!CL:0000710;1.99e-41;20!CL:0000075;7.09e-31;27!CL:0002077;9.27e-21;34!CL:0000149;1.44e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.95e-82,10;CL:0000541,5.95e-82,10;CL:0000147,8.69e-59,14;CL:0002567,5.00e-45,3;CL:0000710,2.16e-41,20;CL:0000075,7.55e-31,27;CL:0002077,1.24e-24,34;CL:0000333,1.32e-19,41;CL:0000133,5.56e-14,59;CL:0000221,1.31e-11,72;CL:0000149,1.57e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000221;8.29e-08;72!CL:0000133;9.40e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!7.67e-26!2 | |ontology_enrichment_disease=DOID:1909!7.67e-26!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;9.07e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.67e-18,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:56351862..56351871,- | |short_description=p@chr12:56351862..56351871,- | ||
}} | }} |
Latest revision as of 10:16, 24 July 2015
Short description: | p@chr12:56351862..56351871, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56351862..56351871, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.95e-82 | 10 |
melanoblast | 5.95e-82 | 10 |
pigment cell | 8.69e-59 | 14 |
light melanocyte | 5.00e-45 | 3 |
neurecto-epithelial cell | 2.16e-41 | 20 |
columnar/cuboidal epithelial cell | 7.55e-31 | 27 |
ecto-epithelial cell | 1.24e-24 | 34 |
migratory neural crest cell | 1.32e-19 | 41 |
neurectodermal cell | 5.56e-14 | 59 |
ectodermal cell | 1.31e-11 | 72 |
visual pigment cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.67e-18 | 2 |