FFCP PHASE1:Hg19::chr13:45048432..45048452,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8848 | |EntrezGene=8848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16826 | |HGNC=16826 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NM_001243798_5end | |association_with_transcript=0bp_to_NM_001243798_5end | ||
|cluster_id=chr13:45048432..45048452,- | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_29_at_TSC22D1_5end | |description=CAGE_peak_29_at_TSC22D1_5end | ||
|id=chr13:45048432..45048452,- | |id=chr13:45048432..45048452,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.13e-23;1!UBERON:0007297;1.48e-12;2!UBERON:0009117;6.78e-10;10!UBERON:0005564;6.78e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;2.32e-12;2!DOID:1287;8.14e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.32e-12,2;DOID:1287,8.14e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.90e-29!115;UBERON:0002780!1.12e-08!41;UBERON:0001890!1.12e-08!41;UBERON:0006240!1.12e-08!41;UBERON:0002346!2.00e-08!90;UBERON:0003080!2.19e-08!42;UBERON:0003075!2.72e-08!86;UBERON:0007284!2.72e-08!86;UBERON:0001893!3.01e-08!34;UBERON:0001049!4.22e-08!57;UBERON:0005068!4.22e-08!57;UBERON:0006241!4.22e-08!57;UBERON:0007135!4.22e-08!57;UBERON:0004151!7.43e-08!3;UBERON:0003978!1.56e-07!3;UBERON:0009751!1.56e-07!3;UBERON:0000946!1.56e-07!3;UBERON:0002523!1.56e-07!3;UBERON:0005983!1.56e-07!3;UBERON:0002165!1.56e-07!3;UBERON:0002062!1.56e-07!3;UBERON:0007280!1.56e-07!3;UBERON:0002791!2.00e-07!33;UBERON:0001950!5.80e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!4.90e-29!115;UBERON:0002780!1.12e-08!41;UBERON:0001890!1.12e-08!41;UBERON:0006240!1.12e-08!41;UBERON:0002346!2.00e-08!90;UBERON:0003080!2.19e-08!42;UBERON:0003075!2.72e-08!86;UBERON:0007284!2.72e-08!86;UBERON:0001893!3.01e-08!34;UBERON:0001049!4.22e-08!57;UBERON:0005068!4.22e-08!57;UBERON:0006241!4.22e-08!57;UBERON:0007135!4.22e-08!57;UBERON:0004151!7.43e-08!3;UBERON:0003978!1.56e-07!3;UBERON:0009751!1.56e-07!3;UBERON:0000946!1.56e-07!3;UBERON:0002523!1.56e-07!3;UBERON:0005983!1.56e-07!3;UBERON:0002165!1.56e-07!3;UBERON:0002062!1.56e-07!3;UBERON:0007280!1.56e-07!3;UBERON:0002791!2.00e-07!33;UBERON:0001950!5.80e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.07e-23;1!UBERON:0002084;5.13e-23;1!UBERON:0002082;5.13e-23;1!UBERON:0003135;6.40e-19;11!UBERON:0000473;3.95e-12;8!UBERON:0003101;8.34e-10;22!UBERON:0000079;8.34e-10;22!UBERON:0005631;9.24e-10;10!UBERON:0000158;9.24e-10;10!UBERON:0006947;8.31e-09;3!UBERON:0004054;8.31e-09;3!UBERON:0004151;1.40e-08;3!UBERON:0003124;1.40e-08;3!UBERON:0000920;1.40e-08;3!UBERON:0005904;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.07e-23,1;UBERON:0002084,5.13e-23,1;UBERON:0002082,5.13e-23,1;UBERON:0010226,5.13e-23,1;UBERON:0003135,6.40e-19,11;UBERON:0000473,3.95e-12,8;UBERON:0003101,8.34e-10,22;UBERON:0000079,8.34e-10,22;UBERON:0006947,8.31e-09,3;UBERON:0004054,8.31e-09,3;UBERON:0004151,1.40e-08,3;UBERON:0000920,1.51e-08,3;UBERON:0005631,3.24e-07,14;UBERON:0000158,3.24e-07,14;UBERON:0005904,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88153966094968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0.71623345421307,4.75143489332222,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.524759999977174,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.658156191461918,0,0,0,0,0,0,0.108647371922008,0,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0,0,0,8.21215340737542,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0.717873024576814,0.599037001496973,3.004582336956,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.262272940674991,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0,0,0,0,0.0802413666891683,0,0,0.286679166302903,0.157771562193185,0.135982980381829,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0,0,0,0.250707539292375,6.21385325389563,6.43113912374828,0,0,0.213233981900981,0,0.258355639344024,0.0620747142958579,0,0.827413057616144,0,0,0,0,0.286888821570705,0,0,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88153966094968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0.71623345421307,4.75143489332222,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.524759999977174,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.658156191461918,0,0,0,0,0,0,0.108647371922008,0,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0.60129367765797,0.103688191397247,0,0,0,0,0,0,0,0,0,8.21215340737542,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0.717873024576814,0.599037001496973,3.004582336956,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.262272940674991,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0.22589216407792,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0,0,0,0,0.0802413666891683,0,0,0.286679166302903,0.157771562193185,0.135982980381829,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0,0,0,0.250707539292375,6.21385325389563,6.43113912374828,0,0,0.213233981900981,0,0.258355639344024,0.0620747142958579,0,0.827413057616144,0,0,0,0,0.286888821570705,0,0,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p29@TSC22D1 | |short_description=p29@TSC22D1 | ||
}} | }} |
Latest revision as of 11:27, 17 September 2015
Short description: | p29@TSC22D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_TSC22D1_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 0bp_to_NM_001243798_5end |
EntrezGene: | TSC22D1 |
HGNC: | 16826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.07e-23 | 1 |
heart left ventricle | 5.13e-23 | 1 |
cardiac ventricle | 5.13e-23 | 1 |
future cardiac ventricle | 5.13e-23 | 1 |
male reproductive organ | 6.40e-19 | 11 |
testis | 3.95e-12 | 8 |
male organism | 8.34e-10 | 22 |
male reproductive system | 8.34e-10 | 22 |
male genital duct | 8.31e-09 | 3 |
internal male genitalia | 8.31e-09 | 3 |
cardiac chamber | 1.40e-08 | 3 |
egg chorion | 1.51e-08 | 3 |
extraembryonic membrane | 3.24e-07 | 14 |
membranous layer | 3.24e-07 | 14 |
duct of male reproductive system | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.32e-12 | 2 |
cardiovascular system disease | 8.14e-07 | 4 |