FFCP PHASE1:Hg19::chr14:96181789..96181822,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000556386,uc001yfd.1_5end | |association_with_transcript=0bp_to_ENST00000556386,uc001yfd.1_5end | ||
|cluster_id=chr14:96181789..96181822,+ | |||
|coexpression_cluster_id=C138 | |coexpression_cluster_id=C138 | ||
|description=CAGE_peak_1_at_ENST00000556386_5end,CAGE_peak_1_at_uc001yfd.1_5end | |description=CAGE_peak_1_at_ENST00000556386_5end,CAGE_peak_1_at_uc001yfd.1_5end | ||
|id=chr14:96181789..96181822,+ | |id=chr14:96181789..96181822,+ | ||
|ontology_enrichment_celltype=CL:0000236!3.51e-42!14;CL:0000945!2.43e-27!24;CL:0000826!2.43e-27!24;CL:0000542!1.45e-12!53;CL:0000051!1.45e-12!53;CL:0000838!5.56e-11!52;CL:0002087!5.42e-07!119 | |ontology_enrichment_celltype=CL:0000236!3.51e-42!14;CL:0000945!2.43e-27!24;CL:0000826!2.43e-27!24;CL:0000542!1.45e-12!53;CL:0000051!1.45e-12!53;CL:0000838!5.56e-11!52;CL:0002087!5.42e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.79e-82;13!CL:0000945;9.79e-44;24!CL:0000542;3.20e-17;53!CL:0000785;3.06e-09;1!CL:0000819;3.06e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.94e-76,14;CL:0000945,9.79e-44,24;CL:0000826,9.79e-44,24;CL:0000542,6.15e-22,53;CL:0000051,6.15e-22,53;CL:0000838,4.95e-19,52;CL:0002087,3.40e-10,115;CL:0000819,3.06e-09,1;CL:0000738,3.12e-08,136;CL:0002031,6.06e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;3.20e-17;53!UBERON:0004872;8.72e-10;7!UBERON:0001045;1.65e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;3.06e-09;1!DOID:8675;3.06e-09;1!DOID:12603;8.36e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.06e-09,1;DOID:8675,3.06e-09,1;DOID:12603,9.02e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.70e-25!15;UBERON:0000179!1.70e-25!15;UBERON:0000463!1.70e-25!15;UBERON:0007023!4.70e-10!115;UBERON:0004177!2.83e-09!7;UBERON:0002193!2.84e-07!112 | |ontology_enrichment_uberon=UBERON:0000178!1.70e-25!15;UBERON:0000179!1.70e-25!15;UBERON:0000463!1.70e-25!15;UBERON:0007023!4.70e-10!115;UBERON:0004177!2.83e-09!7;UBERON:0002193!2.84e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.25e-38;15!UBERON:0000179;8.25e-38;15!UBERON:0000463;8.25e-38;15!UBERON:0002390;1.98e-24;32!UBERON:0002193;3.89e-16;42!UBERON:0002106;1.42e-10;3!UBERON:0002372;1.32e-08;1!UBERON:0001961;1.32e-08;1!UBERON:0001744;1.32e-08;1!UBERON:0001042;1.32e-08;1!UBERON:0001735;1.32e-08;1!UBERON:0001154;1.65e-08;1!UBERON:0001153;1.65e-08;1!UBERON:0009854;1.65e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.07e-38,15;UBERON:0000179,8.07e-38,15;UBERON:0000463,8.07e-38,15;UBERON:0002106,1.32e-10,3;UBERON:0004854,1.32e-10,3;UBERON:0009034,1.32e-10,3;UBERON:0002095,1.32e-10,3;UBERON:0004782,1.32e-10,3;UBERON:0003281,1.32e-10,3;UBERON:0009664,1.32e-10,3;UBERON:0002296,1.32e-10,3;UBERON:0005602,1.32e-10,3;UBERON:0001179,1.32e-10,3;UBERON:0006293,1.32e-10,3;UBERON:0002372,1.42e-08,1;UBERON:0001961,1.42e-08,1;UBERON:0001744,1.42e-08,1;UBERON:0001735,1.42e-08,1;UBERON:0001154,1.65e-08,1;UBERON:0001153,1.65e-08,1;UBERON:0001045,1.65e-08,1;UBERON:0002193,1.84e-07,108;UBERON:0007023,4.96e-07,114;UBERON:0002390,5.32e-07,98;UBERON:0003061,5.32e-07,98 | |||
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| ||
|short_description=p1@ENST00000556386,p1@uc001yfd.1 | |short_description=p1@ENST00000556386,p1@uc001yfd.1 | ||
}} | }} |
Latest revision as of 00:07, 25 July 2015
Short description: | p1@ENST00000556386, p1@uc001yfd.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000556386_5end, CAGE_peak_1_at_uc001yfd.1_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | 0bp_to_ENST00000556386, uc001yfd.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.94e-76 | 14 |
lymphocyte of B lineage | 9.79e-44 | 24 |
pro-B cell | 9.79e-44 | 24 |
lymphocyte | 6.15e-22 | 53 |
common lymphoid progenitor | 6.15e-22 | 53 |
lymphoid lineage restricted progenitor cell | 4.95e-19 | 52 |
nongranular leukocyte | 3.40e-10 | 115 |
B-1 B cell | 3.06e-09 | 1 |
leukocyte | 3.12e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 6.06e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 8.07e-38 | 15 |
haemolymphatic fluid | 8.07e-38 | 15 |
organism substance | 8.07e-38 | 15 |
spleen | 1.32e-10 | 3 |
gastrointestinal system mesentery | 1.32e-10 | 3 |
stomach region | 1.32e-10 | 3 |
mesentery | 1.32e-10 | 3 |
gastrointestinal system serosa | 1.32e-10 | 3 |
mesentery of stomach | 1.32e-10 | 3 |
gut mesentery | 1.32e-10 | 3 |
dorsal mesentery | 1.32e-10 | 3 |
dorsal mesogastrium | 1.32e-10 | 3 |
peritoneal cavity | 1.32e-10 | 3 |
spleen primordium | 1.32e-10 | 3 |
tonsil | 1.42e-08 | 1 |
mucosa-associated lymphoid tissue | 1.42e-08 | 1 |
lymphoid tissue | 1.42e-08 | 1 |
tonsillar ring | 1.42e-08 | 1 |
vermiform appendix | 1.65e-08 | 1 |
caecum | 1.65e-08 | 1 |
midgut | 1.65e-08 | 1 |
hemolymphoid system | 1.84e-07 | 108 |
adult organism | 4.96e-07 | 114 |
hematopoietic system | 5.32e-07 | 98 |
blood island | 5.32e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.06e-09 | 1 |
lymphosarcoma | 3.06e-09 | 1 |
acute leukemia | 9.02e-09 | 1 |