FFCP PHASE1:Hg19::chr15:93447640..93447656,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100422995 | |EntrezGene=100422995 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38299 | |HGNC=38299 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_NR_036136_5end | |association_with_transcript=11bp_to_NR_036136_5end | ||
|cluster_id=chr15:93447640..93447656,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_MIR3175_5end | |description=CAGE_peak_1_at_MIR3175_5end | ||
|id=chr15:93447640..93447656,+ | |id=chr15:93447640..93447656,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.89e-07!140 | |ontology_enrichment_celltype=CL:0000738!2.89e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0002591;5.16e-21;1!CL:0000094;6.28e-11;8!CL:0000081;3.37e-08;11!CL:0000775;5.18e-08;3!CL:0000767;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.43e-21,1;CL:0000094,5.98e-11,8;CL:0000081,3.25e-08,11;CL:0000775,5.18e-08,3;CL:0000767,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001897;3.34e-11;2!UBERON:0000078;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0010225;3.34e-11;2!UBERON:0008886;3.34e-11;2!UBERON:0000473;4.43e-11;8!UBERON:0003135;2.62e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,2.73e-11,2;UBERON:0010225,2.73e-11,2;UBERON:0000473,4.43e-11,8;UBERON:0000078,4.52e-11,2;UBERON:0007497,4.52e-11,2;UBERON:0003643,4.52e-11,2;UBERON:0003504,4.52e-11,2;UBERON:0003469,4.52e-11,2;UBERON:0003496,4.52e-11,2;UBERON:0002012,4.52e-11,2;UBERON:0008886,4.52e-11,2;UBERON:0007303,4.52e-11,2;UBERON:0002061,4.52e-11,2;UBERON:0005432,4.52e-11,2;UBERON:0004363,4.52e-11,2;UBERON:0003135,2.62e-08,11;UBERON:0004145,8.29e-08,3 | |||
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| ||
|short_description=p1@MIR3175 | |short_description=p1@MIR3175 | ||
}} | }} |
Latest revision as of 23:22, 19 September 2015
Short description: | p1@MIR3175 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR3175_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 11bp_to_NR_036136_5end |
EntrezGene: | MIR3175 |
HGNC: | 38299 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.43e-21 | 1 |
granulocyte | 5.98e-11 | 8 |
blood cell | 3.25e-08 | 11 |
neutrophil | 5.18e-08 | 3 |
basophil | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 2.73e-11 | 2 |
thalamic complex | 2.73e-11 | 2 |
testis | 4.43e-11 | 8 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.52e-11 | 2 |
developing epithelial placode | 4.52e-11 | 2 |
respiratory system arterial blood vessel | 4.52e-11 | 2 |
respiratory system blood vessel | 4.52e-11 | 2 |
respiratory system artery | 4.52e-11 | 2 |
head blood vessel | 4.52e-11 | 2 |
pulmonary artery | 4.52e-11 | 2 |
pulmonary vascular system | 4.52e-11 | 2 |
pharyngeal vasculature | 4.52e-11 | 2 |
truncus arteriosus | 4.52e-11 | 2 |
aortic sac | 4.52e-11 | 2 |
pharyngeal arch artery | 4.52e-11 | 2 |
male reproductive organ | 2.62e-08 | 11 |
outflow tract | 8.29e-08 | 3 |