FFCP PHASE1:Hg19::chr16:69748896..69748923,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:69748896..69748923,- | |||
|coexpression_cluster_id=C3588 | |coexpression_cluster_id=C3588 | ||
|description=CAGE_peak_at_chr16:69748896..69748923,- | |description=CAGE_peak_at_chr16:69748896..69748923,- | ||
|id=chr16:69748896..69748923,- | |id=chr16:69748896..69748923,- | ||
|ontology_enrichment_celltype=CL:0000055!2.24e-16!180;CL:0000220!5.72e-16!246;CL:0002321!1.02e-15!248;CL:0000548!1.17e-15!679;CL:0000004!1.17e-15!679;CL:0000255!1.17e-15!679;CL:0000012!4.57e-15!682;CL:0000057!5.45e-15!75;CL:0000066!2.67e-13!254;CL:0000222!1.59e-10!119;CL:0000003!4.18e-10!722;CL:0000063!5.49e-09!578;CL:0000144!2.27e-08!625;CL:0000213!2.75e-07!57;CL:0000215!2.75e-07!57;CL:0002371!7.22e-07!591 | |ontology_enrichment_celltype=CL:0000055!2.24e-16!180;CL:0000220!5.72e-16!246;CL:0002321!1.02e-15!248;CL:0000548!1.17e-15!679;CL:0000004!1.17e-15!679;CL:0000255!1.17e-15!679;CL:0000012!4.57e-15!682;CL:0000057!5.45e-15!75;CL:0000066!2.67e-13!254;CL:0000222!1.59e-10!119;CL:0000003!4.18e-10!722;CL:0000063!5.49e-09!578;CL:0000144!2.27e-08!625;CL:0000213!2.75e-07!57;CL:0000215!2.75e-07!57;CL:0002371!7.22e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002559;2.47e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,1.80e-09,5;CL:0002321,4.54e-09,250;CL:0000057,3.34e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.45e-07!106 | |ontology_enrichment_disease=DOID:305!9.45e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.63e-09!216;UBERON:0003104!3.61e-08!238;UBERON:0009142!3.61e-08!238;UBERON:0000914!4.59e-08!83;UBERON:0002329!4.59e-08!83;UBERON:0003077!4.59e-08!83;UBERON:0003059!4.59e-08!83;UBERON:0007282!4.59e-08!83;UBERON:0009618!4.59e-08!83;UBERON:0007285!4.59e-08!83;UBERON:0003102!7.20e-08!95;UBERON:0005256!2.35e-07!143;UBERON:0000481!9.89e-07!347 | |ontology_enrichment_uberon=UBERON:0002100!2.63e-09!216;UBERON:0003104!3.61e-08!238;UBERON:0009142!3.61e-08!238;UBERON:0000914!4.59e-08!83;UBERON:0002329!4.59e-08!83;UBERON:0003077!4.59e-08!83;UBERON:0003059!4.59e-08!83;UBERON:0007282!4.59e-08!83;UBERON:0009618!4.59e-08!83;UBERON:0007285!4.59e-08!83;UBERON:0003102!7.20e-08!95;UBERON:0005256!2.35e-07!143;UBERON:0000481!9.89e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002073;2.47e-09;5!UBERON:0001737;3.72e-09;9!UBERON:0001557;3.72e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.80e-09,5;UBERON:0005086,1.80e-09,5;UBERON:0001737,5.63e-09,9;UBERON:0008947,9.18e-07,38;UBERON:0003258,9.18e-07,38 | |||
|phase1_expression=0.363356758541113,1.71280419112787,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0.522371256399677,0,0.697801167972428,0,0.263766978228454,1.36142988256051,2.31978163009541,3.36162573225888,5.42425075221579,0,1.46379839637152,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.502170558379211,0,0.0821005894499457,0.157421562627358,0,0,0,1.83884244895785,1.204823675113,1.84877005083394,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.12786256184353,0.722878304769133,1.50401373190767,2.89693037921647,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0,0.728590576585084,0.741568885568859,0.649094787309367,0.696518949197069,0.26591592103773,0,0,0,0.198762407366705,0,1.04142150482278,1.69592382577203,0.838998872419812,0.825354125820202,0.835979866147242,0.258416759169329,0.71153252537342,0,1.20848795132744,0,0.24406205754817,0,2.43042584364528,0.803697554556718,0.898117490504679,0.563057402416611,0,0,0.549605231791222,0,0,1.3082821564276,0,0.506522046658319,0.132409180813219,0,1.77334191099179,1.12135520028461,1.06748995729705,0.24666754841716,0,1.75123873690594,0.980771418680752,0.756787138224657,2.88087962239999,0,0.624320153660641,1.1409436430889,0.747243402759005,0.469737994575059,0.647491777472526,0.702254033511242,1.02077085627447,1.71968044236475,1.65321249881225,0,3.70900393917835,1.82032272387605,2.15585442544872,0.505008341862199,1.37630371859161,0.554128230968366,1.75591048352335,6.12975591598039,0.45071417671979,0.226864366320042,0.179389635688862,1.06778694409284,0.211931901159562,0.900273288253207,0.92747276314595,1.03056216018252,0.930584281657949,0.168776332241266,0.779496041289589,0.504867548488229,0.368199594569197,1.13152239773168,0,0.604512589365842,0.339121184620975,0,0,0.573609190778008,0.121973706129595,0,0.348581828608555,0.518305275076852,0,0,6.25798129319264,5.14592750554308,5.52539685409922,2.78620756819187,2.88751792667834,1.53798840051797,1.18009283054671,1.68707720918437,2.09558548191549,1.08939722046203,0.474541238222193,1.34831308160164,1.17732879075208,2.69323009862473,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.343135620597051,0.329250856225877,0,0.201057944823262,0.0925884451585296,0.325808305310325,4.15973914111831,0,0,0,0.721832238805369,0.925971025153221,0,0,0,0,0,0.594524649154913,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0.063497894292169,1.52795370223311,0,3.4214489204541,3.496134751913,2.10240140490742,2.85826432630578,0.112131084345361,0.87192013766656,0.2933531432838,0,0,2.535908257668,0.26593811658487,4.16029747645464,1.54324424557285,0,1.3321108950805,0.142977993658148,0,0.823240336780769,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0.479249710983165,1.14861935834114,2.85273810081437,0.723906533337896,3.90405012845728,0.358121926479791,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.858840442033979,2.50085260529839,0.813795071099207,2.9115920614313,9.09987842865525,2.83864347061082,0.35142424497814,0,0,0,0,0.184369168541703,1.04260337361699,0.783204629850962,0,0,0,0,0,0,0.907170879989041,0.496215615637554,0,0.561320188866147,0.384417447767103,1.02341449813341,0.160853921143607,0,0.925258162815933,1.06537035187876,0.164254312027618,0.519254429183621,1.27831416305955,0.120859449591622,2.00506470303285,0,0.803701137152247,3.09554985611419,3.01586154406675,0,0,0,0,0,4.54933536283586,3.40187410553031,0.647747748306418,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0.219259876645935,0,0.769350375349168,0,0,0,0,0.082509499920588,0,0,0,0.290012154876366,1.54048617114644,0.614014698904518,1.24052915236078,0.322260734604821,0.725083469571143,0.681813019328807,0.0890320356467374,0.330569830721956,0.384380134730212,0.255225424989168,0.50578890427775,1.85938219718914,0,0,0,0,0,0,0.286249773483982,0,0,0.38126038784765,0,0,0.636406495851874,0,0.359744915166629,1.37268514868027,0.824686816419805,0.202182481573316,1.58510321173008,0.842516912477962,0.48763373908959,0.731140468893853,2.11300293513511,0,1.55545975149084,2.26016233240486,0,0,0.876901770507525,0.578775534266688,0.655894752046633,0,0.92947049429925,0.563391205064483,0,0,0,0.709522128141196,1.47775344708365,1.31717957183961,0.379473173765715,1.74967360122491,0.192444225451024,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0.201799707191048,0,0,0,0,0,0.390776190804081,0.278406173895242,0,0,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,2.27308917445131,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.622079175323615,0.0898683511473268,1.25314822272926,0,0,0,2.22273980289274,0,0,0,0.7812832832557,0.262379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| ||
|short_description=p@chr16:69748896..69748923,- | |short_description=p@chr16:69748896..69748923,- | ||
}} | }} |
Latest revision as of 11:53, 25 July 2015
Short description: | p@chr16:69748896..69748923, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:69748896..69748923, - |
Coexpression cluster: | C3588_Olfactory_normal_large_Fibroblast_Hair_mixed_Keratocytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 1.80e-09 | 5 |
embryonic cell | 4.54e-09 | 250 |
fibroblast | 3.34e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 1.80e-09 | 5 |
hair follicle placode | 1.80e-09 | 5 |
larynx | 5.63e-09 | 9 |
respiratory primordium | 9.18e-07 | 38 |
endoderm of foregut | 9.18e-07 | 38 |