FFCP PHASE1:Hg19::chr18:51746146..51746168,-: Difference between revisions
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|id=chr18:51746146..51746168,-
|short_description=p@chr18:51746146..51746168,-
|description=CAGE_peak_at_chr18:51746146..51746168,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:51746146..51746168,- | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr18:51746146..51746168,- | |||
|id=chr18:51746146..51746168,- | |||
|ontology_enrichment_celltype=CL:0000945!1.76e-31!24;CL:0000826!1.76e-31!24;CL:0000542!2.63e-20!53;CL:0000051!2.63e-20!53;CL:0000785!2.74e-20!2;CL:0000955!2.74e-20!2;CL:0000818!2.74e-20!2;CL:0000954!2.74e-20!2;CL:0000816!2.74e-20!2;CL:0000838!3.95e-17!52;CL:0000817!7.42e-14!3;CL:0000819!3.76e-11!1;CL:0000946!6.77e-11!1;CL:0000786!6.77e-11!1;CL:0000980!6.77e-11!1;CL:0002087!5.08e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.18e-50;24!CL:0000785;8.64e-26;1!CL:0000819;8.64e-26;1!CL:0000542;5.01e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.18e-50,24;CL:0000826,4.18e-50,24;CL:0000819,5.93e-26,1;CL:0000838,2.91e-23,52;CL:0000542,7.94e-23,53;CL:0000051,7.94e-23,53;CL:0000785,1.07e-13,2;CL:0000955,1.07e-13,2;CL:0000818,1.07e-13,2;CL:0000954,1.07e-13,2;CL:0000816,1.07e-13,2;CL:0002087,1.84e-10,115;CL:0002031,5.00e-10,120;CL:0000817,1.41e-09,3;CL:0000738,7.53e-09,136;CL:0002032,1.81e-07,161;CL:0000837,1.81e-07,161;CL:0000037,3.74e-07,168;CL:0000988,8.75e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;1.29e-13;2!CL:0000051;5.01e-11;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.09e-24!10;DOID:0060073!3.76e-11!1;DOID:8675!3.76e-11!1;DOID:630!5.05e-11!1;DOID:0050177!5.05e-11!1;DOID:0050427!5.05e-11!1;DOID:12603!1.10e-10!1;DOID:2531!1.59e-08!51;DOID:0060083!1.59e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.01e-39;10!DOID:630;8.64e-26;1!DOID:0050177;8.64e-26;1!DOID:0060073;8.64e-26;1!DOID:8675;8.64e-26;1!DOID:0050427;8.64e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.67e-40,10;DOID:0060073,5.93e-26,1;DOID:8675,5.93e-26,1;DOID:630,1.26e-25,1;DOID:0050177,1.26e-25,1;DOID:0050427,1.26e-25,1;DOID:2531,3.33e-08,51;DOID:0060083,3.33e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001154!5.57e-11!1;UBERON:0001153!5.57e-11!1;UBERON:0002372!1.77e-10!1;UBERON:0001961!1.77e-10!1;UBERON:0001744!1.77e-10!1;UBERON:0001735!1.77e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.01e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.01e-09,3;UBERON:0004854,1.01e-09,3;UBERON:0009034,1.01e-09,3;UBERON:0002095,1.01e-09,3;UBERON:0004782,1.01e-09,3;UBERON:0003281,1.01e-09,3;UBERON:0009664,1.01e-09,3;UBERON:0002296,1.01e-09,3;UBERON:0005602,1.01e-09,3;UBERON:0001179,1.01e-09,3;UBERON:0006293,1.01e-09,3 | |||
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|short_description=p@chr18:51746146..51746168,- | |||
}} | }} |
Latest revision as of 01:18, 26 July 2015
Short description: | p@chr18:51746146..51746168, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:51746146..51746168, - |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.18e-50 | 24 |
pro-B cell | 4.18e-50 | 24 |
B-1 B cell | 5.93e-26 | 1 |
lymphoid lineage restricted progenitor cell | 2.91e-23 | 52 |
lymphocyte | 7.94e-23 | 53 |
common lymphoid progenitor | 7.94e-23 | 53 |
mature B cell | 1.07e-13 | 2 |
pre-B-II cell | 1.07e-13 | 2 |
transitional stage B cell | 1.07e-13 | 2 |
small pre-B-II cell | 1.07e-13 | 2 |
immature B cell | 1.07e-13 | 2 |
nongranular leukocyte | 1.84e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 5.00e-10 | 120 |
precursor B cell | 1.41e-09 | 3 |
leukocyte | 7.53e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.81e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-07 | 161 |
hematopoietic stem cell | 3.74e-07 | 168 |
hematopoietic cell | 8.75e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.01e-09 | 3 |
gastrointestinal system mesentery | 1.01e-09 | 3 |
stomach region | 1.01e-09 | 3 |
mesentery | 1.01e-09 | 3 |
gastrointestinal system serosa | 1.01e-09 | 3 |
mesentery of stomach | 1.01e-09 | 3 |
gut mesentery | 1.01e-09 | 3 |
dorsal mesentery | 1.01e-09 | 3 |
dorsal mesogastrium | 1.01e-09 | 3 |
peritoneal cavity | 1.01e-09 | 3 |
spleen primordium | 1.01e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.67e-40 | 10 |
lymphatic system cancer | 5.93e-26 | 1 |
lymphosarcoma | 5.93e-26 | 1 |
genetic disease | 1.26e-25 | 1 |
monogenic disease | 1.26e-25 | 1 |
xeroderma pigmentosum | 1.26e-25 | 1 |
hematologic cancer | 3.33e-08 | 51 |
immune system cancer | 3.33e-08 | 51 |