FFCP PHASE1:Hg19::chr17:77925835..77925864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:77925835..77925864,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_at_chr17:77925835..77925864,+ | |description=CAGE_peak_at_chr17:77925835..77925864,+ | ||
|id=chr17:77925835..77925864,+ | |id=chr17:77925835..77925864,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.14e-27!10;CL:0000541!1.14e-27!10;CL:0000147!1.68e-19!14;CL:0002567!3.13e-18!3;CL:0000710!2.30e-13!20;CL:0000075!1.20e-09!27;CL:0002077!1.02e-07!33;CL:0000333!2.32e-07!41;CL:0002566!3.73e-07!1 | |ontology_enrichment_celltype=CL:0000148!1.14e-27!10;CL:0000541!1.14e-27!10;CL:0000147!1.68e-19!14;CL:0002567!3.13e-18!3;CL:0000710!2.30e-13!20;CL:0000075!1.20e-09!27;CL:0002077!1.02e-07!33;CL:0000333!2.32e-07!41;CL:0002566!3.73e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.65e-101;10!CL:0002567;5.41e-85;3!CL:0000147;2.20e-72;14!CL:0000710;7.44e-51;20!CL:0000075;8.21e-38;27!CL:0002566;2.37e-29;1!CL:0002077;3.68e-28;34!CL:0000149;2.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.26e-101,10;CL:0000541,4.26e-101,10;CL:0002567,5.41e-85,3;CL:0000147,2.07e-72,14;CL:0000710,7.12e-51,20;CL:0000075,7.95e-38,27;CL:0002077,3.87e-30,34;CL:0002566,2.37e-29,1;CL:0000333,6.39e-24,41;CL:0000133,5.71e-17,59;CL:0000221,4.85e-14,72;CL:0000149,2.43e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;3.62e-10;59!CL:0000221;4.42e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!1.61e-12!2 | |ontology_enrichment_disease=DOID:1909!1.61e-12!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.55e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.74e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001893!5.47e-23!34;UBERON:0002780!8.13e-22!41;UBERON:0001890!8.13e-22!41;UBERON:0006240!8.13e-22!41;UBERON:0003080!3.05e-21!42;UBERON:0001869!9.12e-21!32;UBERON:0002791!3.98e-20!33;UBERON:0002020!1.75e-19!34;UBERON:0003528!1.75e-19!34;UBERON:0001950!6.55e-19!20;UBERON:0001049!1.95e-17!57;UBERON:0005068!1.95e-17!57;UBERON:0006241!1.95e-17!57;UBERON:0007135!1.95e-17!57;UBERON:0002619!3.87e-17!22;UBERON:0002616!9.45e-17!59;UBERON:0003056!4.40e-16!61;UBERON:0007023!7.27e-16!115;UBERON:0000955!9.16e-16!69;UBERON:0006238!9.16e-16!69;UBERON:0005743!9.75e-16!86;UBERON:0002346!4.19e-15!90;UBERON:0000956!5.43e-15!25;UBERON:0000203!5.43e-15!25;UBERON:0001017!1.12e-14!82;UBERON:0000200!1.53e-14!6;UBERON:0003075!4.94e-14!86;UBERON:0007284!4.94e-14!86;UBERON:0000073!6.40e-14!94;UBERON:0001016!6.40e-14!94;UBERON:0001871!4.20e-11!7;UBERON:0002420!7.50e-10!9;UBERON:0007245!7.50e-10!9;UBERON:0010009!7.50e-10!9;UBERON:0010011!7.50e-10!9;UBERON:0000454!7.50e-10!9;UBERON:0000924!5.96e-09!173;UBERON:0006601!5.96e-09!173;UBERON:0000033!1.09e-08!123;UBERON:0002771!2.64e-08!3;UBERON:0004121!3.47e-08!169;UBERON:0000153!3.92e-08!129;UBERON:0007811!3.92e-08!129;UBERON:0009663!1.54e-07!7;UBERON:0001154!5.89e-07!1;UBERON:0001153!5.89e-07!1;UBERON:0001882!6.24e-07!1;UBERON:0005403!6.24e-07!1;UBERON:0002038!8.75e-07!1;UBERON:0009661!8.75e-07!1 | |ontology_enrichment_uberon=UBERON:0001893!5.47e-23!34;UBERON:0002780!8.13e-22!41;UBERON:0001890!8.13e-22!41;UBERON:0006240!8.13e-22!41;UBERON:0003080!3.05e-21!42;UBERON:0001869!9.12e-21!32;UBERON:0002791!3.98e-20!33;UBERON:0002020!1.75e-19!34;UBERON:0003528!1.75e-19!34;UBERON:0001950!6.55e-19!20;UBERON:0001049!1.95e-17!57;UBERON:0005068!1.95e-17!57;UBERON:0006241!1.95e-17!57;UBERON:0007135!1.95e-17!57;UBERON:0002619!3.87e-17!22;UBERON:0002616!9.45e-17!59;UBERON:0003056!4.40e-16!61;UBERON:0007023!7.27e-16!115;UBERON:0000955!9.16e-16!69;UBERON:0006238!9.16e-16!69;UBERON:0005743!9.75e-16!86;UBERON:0002346!4.19e-15!90;UBERON:0000956!5.43e-15!25;UBERON:0000203!5.43e-15!25;UBERON:0001017!1.12e-14!82;UBERON:0000200!1.53e-14!6;UBERON:0003075!4.94e-14!86;UBERON:0007284!4.94e-14!86;UBERON:0000073!6.40e-14!94;UBERON:0001016!6.40e-14!94;UBERON:0001871!4.20e-11!7;UBERON:0002420!7.50e-10!9;UBERON:0007245!7.50e-10!9;UBERON:0010009!7.50e-10!9;UBERON:0010011!7.50e-10!9;UBERON:0000454!7.50e-10!9;UBERON:0000924!5.96e-09!173;UBERON:0006601!5.96e-09!173;UBERON:0000033!1.09e-08!123;UBERON:0002771!2.64e-08!3;UBERON:0004121!3.47e-08!169;UBERON:0000153!3.92e-08!129;UBERON:0007811!3.92e-08!129;UBERON:0009663!1.54e-07!7;UBERON:0001154!5.89e-07!1;UBERON:0001153!5.89e-07!1;UBERON:0001882!6.24e-07!1;UBERON:0005403!6.24e-07!1;UBERON:0002038!8.75e-07!1;UBERON:0009661!8.75e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr17:77925835..77925864,+ | |short_description=p@chr17:77925835..77925864,+ | ||
}} | }} |
Latest revision as of 22:26, 25 July 2015
Short description: | p@chr17:77925835..77925864, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77925835..77925864, + |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.26e-101 | 10 |
melanoblast | 4.26e-101 | 10 |
light melanocyte | 5.41e-85 | 3 |
pigment cell | 2.07e-72 | 14 |
neurecto-epithelial cell | 7.12e-51 | 20 |
columnar/cuboidal epithelial cell | 7.95e-38 | 27 |
ecto-epithelial cell | 3.87e-30 | 34 |
dark melanocyte | 2.37e-29 | 1 |
migratory neural crest cell | 6.39e-24 | 41 |
neurectodermal cell | 5.71e-17 | 59 |
ectodermal cell | 4.85e-14 | 72 |
visual pigment cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.74e-15 | 2 |