FFCP PHASE1:Hg19::chr19:10978801..10978827,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:10978801..10978827,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_at_chr19:10978801..10978827,+ | |description=CAGE_peak_at_chr19:10978801..10978827,+ | ||
|id=chr19:10978801..10978827,+ | |id=chr19:10978801..10978827,+ | ||
|ontology_enrichment_celltype=CL:0000945!9.29e-48!24;CL:0000826!9.29e-48!24;CL:0000738!1.17e-34!140;CL:0002087!1.75e-34!119;CL:0002031!5.20e-31!124;CL:0000236!2.19e-27!14;CL:0002032!3.74e-27!165;CL:0000837!3.74e-27!165;CL:0000542!4.40e-27!53;CL:0000051!4.40e-27!53;CL:0000037!1.41e-26!172;CL:0000566!1.41e-26!172;CL:0000838!1.32e-25!52;CL:0000988!2.91e-24!182;CL:0000990!7.19e-15!8;CL:0000451!7.16e-12!10;CL:0002009!1.65e-10!65;CL:0002194!7.21e-10!63;CL:0000576!7.21e-10!63;CL:0000040!7.21e-10!63;CL:0000559!7.21e-10!63;CL:0000557!3.72e-09!71;CL:0000840!4.76e-09!5;CL:0001029!4.76e-09!5;CL:0000839!2.29e-08!70;CL:0000766!3.58e-08!76;CL:0000453!1.47e-07!5;CL:0002619!2.46e-07!3;CL:0000763!4.00e-07!112;CL:0000049!4.00e-07!112 | |ontology_enrichment_celltype=CL:0000945!9.29e-48!24;CL:0000826!9.29e-48!24;CL:0000738!1.17e-34!140;CL:0002087!1.75e-34!119;CL:0002031!5.20e-31!124;CL:0000236!2.19e-27!14;CL:0002032!3.74e-27!165;CL:0000837!3.74e-27!165;CL:0000542!4.40e-27!53;CL:0000051!4.40e-27!53;CL:0000037!1.41e-26!172;CL:0000566!1.41e-26!172;CL:0000838!1.32e-25!52;CL:0000988!2.91e-24!182;CL:0000990!7.19e-15!8;CL:0000451!7.16e-12!10;CL:0002009!1.65e-10!65;CL:0002194!7.21e-10!63;CL:0000576!7.21e-10!63;CL:0000040!7.21e-10!63;CL:0000559!7.21e-10!63;CL:0000557!3.72e-09!71;CL:0000840!4.76e-09!5;CL:0001029!4.76e-09!5;CL:0000839!2.29e-08!70;CL:0000766!3.58e-08!76;CL:0000453!1.47e-07!5;CL:0002619!2.46e-07!3;CL:0000763!4.00e-07!112;CL:0000049!4.00e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.41e-98;24!CL:0000236;1.89e-66;13!CL:0000542;2.70e-30;53!CL:0000785;9.39e-08;1!CL:0000819;9.39e-08;1!CL:0002087;1.44e-07;104!CL:0000946;2.91e-07;1!CL:0000786;2.91e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.03e-98,24;CL:0000826,8.03e-98,24;CL:0000236,4.77e-72,14;CL:0000838,1.83e-47,52;CL:0000542,1.74e-46,53;CL:0000051,1.74e-46,53;CL:0002087,4.28e-23,115;CL:0000738,7.74e-23,136;CL:0002031,6.01e-22,120;CL:0002032,1.53e-18,161;CL:0000837,1.53e-18,161;CL:0000037,1.44e-17,168;CL:0000988,2.00e-16,177;CL:0000785,2.34e-13,2;CL:0000955,2.34e-13,2;CL:0000818,2.34e-13,2;CL:0000954,2.34e-13,2;CL:0000816,2.34e-13,2;CL:0000817,3.38e-09,3;CL:0000819,1.03e-07,1;CL:0000946,2.50e-07,1;CL:0000786,2.50e-07,1;CL:0000980,2.50e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.70e-30;53!CL:0000954;2.48e-13;2!UBERON:0008801;2.91e-07;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.23e-10!10 | |ontology_enrichment_disease=DOID:0060058!1.23e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.84e-15;10!DOID:630;9.39e-08;1!DOID:0050177;9.39e-08;1!DOID:0060073;9.39e-08;1!DOID:8675;9.39e-08;1!DOID:0050427;9.39e-08;1!DOID:4960;2.91e-07;1!DOID:0070004;2.91e-07;1!DOID:2355;2.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.53e-15,10;DOID:630,8.00e-08,1;DOID:0050177,8.00e-08,1;DOID:0050427,8.00e-08,1;DOID:0060073,1.03e-07,1;DOID:8675,1.03e-07,1;DOID:4960,2.83e-07,1;DOID:0070004,2.83e-07,1;DOID:2355,3.01e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.17e-13!102;UBERON:0003061!5.17e-13!102;UBERON:0002193!4.49e-12!112;UBERON:0002371!1.81e-08!80;UBERON:0002405!3.63e-08!115;UBERON:0001474!1.71e-07!86;UBERON:0004177!2.06e-07!7;UBERON:0002106!2.75e-07!3;UBERON:0004854!2.75e-07!3;UBERON:0009034!2.75e-07!3;UBERON:0002095!2.75e-07!3;UBERON:0004782!2.75e-07!3;UBERON:0003281!2.75e-07!3;UBERON:0009664!2.75e-07!3;UBERON:0002296!2.75e-07!3;UBERON:0005602!2.75e-07!3;UBERON:0001179!2.75e-07!3;UBERON:0006293!2.75e-07!3 | |ontology_enrichment_uberon=UBERON:0002390!5.17e-13!102;UBERON:0003061!5.17e-13!102;UBERON:0002193!4.49e-12!112;UBERON:0002371!1.81e-08!80;UBERON:0002405!3.63e-08!115;UBERON:0001474!1.71e-07!86;UBERON:0004177!2.06e-07!7;UBERON:0002106!2.75e-07!3;UBERON:0004854!2.75e-07!3;UBERON:0009034!2.75e-07!3;UBERON:0002095!2.75e-07!3;UBERON:0004782!2.75e-07!3;UBERON:0003281!2.75e-07!3;UBERON:0009664!2.75e-07!3;UBERON:0002296!2.75e-07!3;UBERON:0005602!2.75e-07!3;UBERON:0001179!2.75e-07!3;UBERON:0006293!2.75e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.91e-07;1!UBERON:0001567;2.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,2.66e-07,1;UBERON:0001567,2.66e-07,1;UBERON:0008801,2.66e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.492603536699674,1.33808328233255,0,0,0.309632246632152,0,0,0,3.09868802321207,1.13735385989937,0,0,0,0.217010870715852,1.34349284543955,0.32389366601898,0.77272670290256,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0.211255286311942,0,0.419317291016752,0,0.300353785683013,0,0,0,0.365328307529268,1.75996244461323,3.27683166757279,1.77901850772711,3.41384178053206,2.40237592221607,5.74752439954483,3.30522436392431,8.58648379081828,1.1384259382189,2.34894875748376,1.14681968437569,0,0,0,0,0,0,4.51403537554831,0,0,0,2.22820913770347,0,0.443067789167242,0,2.94610035369053,2.08094956095805,0.822189523018381,1.93445012450094,0.289803085735052,0,0,0,0.339928028092699,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.29818957461873,0.696518949197069,0.797747763113191,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,1.84627208191604,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,3.10173141666632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35477331305255,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,1.18566979138767,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,1.7537427795545,0.398594520940089,2.28991551958182,0,0,0,0,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.469919589899268,0.322289439867886,1.89888196257365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0.5388164241167,0.286888821570705,0,0,0,0,0,0,0,0,0,0,3.8468219076388 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| ||
|short_description=p@chr19:10978801..10978827,+ | |short_description=p@chr19:10978801..10978827,+ | ||
}} | }} |
Latest revision as of 03:17, 26 July 2015
Short description: | p@chr19:10978801..10978827, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:10978801..10978827, + |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.03e-98 | 24 |
pro-B cell | 8.03e-98 | 24 |
B cell | 4.77e-72 | 14 |
lymphoid lineage restricted progenitor cell | 1.83e-47 | 52 |
lymphocyte | 1.74e-46 | 53 |
common lymphoid progenitor | 1.74e-46 | 53 |
nongranular leukocyte | 4.28e-23 | 115 |
leukocyte | 7.74e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 6.01e-22 | 120 |
hematopoietic oligopotent progenitor cell | 1.53e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-18 | 161 |
hematopoietic stem cell | 1.44e-17 | 168 |
hematopoietic cell | 2.00e-16 | 177 |
mature B cell | 2.34e-13 | 2 |
pre-B-II cell | 2.34e-13 | 2 |
transitional stage B cell | 2.34e-13 | 2 |
small pre-B-II cell | 2.34e-13 | 2 |
immature B cell | 2.34e-13 | 2 |
precursor B cell | 3.38e-09 | 3 |
B-1 B cell | 1.03e-07 | 1 |
antibody secreting cell | 2.50e-07 | 1 |
plasma cell | 2.50e-07 | 1 |
plasmablast | 2.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 2.66e-07 | 1 |
cheek | 2.66e-07 | 1 |
parotid gland primordium | 2.66e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.53e-15 | 10 |
genetic disease | 8.00e-08 | 1 |
monogenic disease | 8.00e-08 | 1 |
xeroderma pigmentosum | 8.00e-08 | 1 |
lymphatic system cancer | 1.03e-07 | 1 |
lymphosarcoma | 1.03e-07 | 1 |
bone marrow cancer | 2.83e-07 | 1 |
myeloma | 2.83e-07 | 1 |
anemia | 3.01e-07 | 1 |