FFCP PHASE1:Hg19::chr18:61420311..61420320,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:61420311..61420320,+
|short_description=p13@SERPINB7
|description=CAGE_peak_13_at_SERPINB7_5end
|association_with_transcript=34bp_to_ENST00000336429,NM_00...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8710 | |EntrezGene=8710 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13902 | |HGNC=13902 | ||
|TSSclassifier=strong | |||
|UniProt=O75635 | |UniProt=O75635 | ||
|association_with_transcript=34bp_to_ENST00000336429,NM_001040147,uc002ljl.2_5end | |||
|cluster_id=chr18:61420311..61420320,+ | |||
|coexpression_cluster_id=C312 | |||
|description=CAGE_peak_13_at_SERPINB7_5end | |||
|id=chr18:61420311..61420320,+ | |||
|ontology_enrichment_celltype=CL:0002623!4.60e-09!3;CL:0002251!5.80e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:1000415;6.43e-14;2!CL:0001014;8.82e-14;2!CL:0001016;8.82e-14;2!CL:0002623;1.24e-09;3!CL:0000346;1.67e-09;3!CL:1000428;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,6.43e-14,2;CL:0001014,1.07e-13,2;CL:0001016,1.07e-13,2;CL:0002623,1.19e-09,3;CL:0000346,1.54e-09,3;CL:1000428,1.54e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!2.27e-13!11;UBERON:0001042!9.91e-10!10;UBERON:0009145!9.91e-10!10;UBERON:0003408!1.06e-09!10;UBERON:0001004!1.58e-09!72;UBERON:0002110!3.92e-09!3;UBERON:0006242!3.92e-09!3;UBERON:0000078!3.45e-08!18;UBERON:0002294!3.56e-08!7;UBERON:0001173!3.56e-08!7;UBERON:0004912!3.56e-08!7;UBERON:0001557!1.34e-07!19;UBERON:0000065!1.45e-07!53;UBERON:0002372!1.54e-07!1;UBERON:0001961!1.54e-07!1;UBERON:0001744!1.54e-07!1;UBERON:0001735!1.54e-07!1;UBERON:0004119!1.67e-07!169;UBERON:0000925!1.67e-07!169;UBERON:0006595!1.67e-07!169;UBERON:0000165!3.37e-07!28;UBERON:0000930!3.37e-07!28;UBERON:0000166!5.09e-07!21;UBERON:0002370!9.94e-07!4;UBERON:0005058!9.94e-07!4;UBERON:0009113!9.94e-07!4;UBERON:0003295!9.94e-07!4;UBERON:0005562!9.94e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;9.79e-26;1!UBERON:0001961;9.79e-26;1!UBERON:0001744;9.79e-26;1!UBERON:0001042;9.79e-26;1!UBERON:0001735;9.79e-26;1!UBERON:0006562;1.37e-13;2!UBERON:0002110;1.01e-09;3!UBERON:0000412;1.67e-09;3!UBERON:0001992;1.67e-09;3!UBERON:0002119;1.54e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.26e-25,1;UBERON:0001961,1.26e-25,1;UBERON:0001744,1.26e-25,1;UBERON:0001735,1.26e-25,1;UBERON:0002110,1.01e-09,3;UBERON:0006242,1.01e-09,3;UBERON:0000412,1.54e-09,3;UBERON:0001992,1.54e-09,3;UBERON:0002119,1.59e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992425680696705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93572320490184,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69881867298163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0.207216164163037,0,2.76503864725637,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85686301769052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0,0,0.435433495793923,0,1.0776328482334,0.717222053926764,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992425680696705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93572320490184,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69881867298163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0.207216164163037,0,2.76503864725637,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85686301769052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0,0,0.435433495793923,0,1.0776328482334,0.717222053926764,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@SERPINB7 | |||
}} | }} |
Latest revision as of 04:18, 20 September 2015
Short description: | p13@SERPINB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SERPINB7_5end |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | 34bp_to_ENST00000336429, NM_001040147, uc002ljl.2_5end |
EntrezGene: | SERPINB7 |
HGNC: | 13902 |
UniProt: | O75635 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 6.43e-14 | 2 |
CD1a-positive Langerhans cell | 1.07e-13 | 2 |
immature CD1a-positive Langerhans cell | 1.07e-13 | 2 |
acinar cell of salivary gland | 1.19e-09 | 3 |
hair follicle dermal papilla cell | 1.54e-09 | 3 |
stem cell of epidermis | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.26e-25 | 1 |
mucosa-associated lymphoid tissue | 1.26e-25 | 1 |
lymphoid tissue | 1.26e-25 | 1 |
tonsillar ring | 1.26e-25 | 1 |
gallbladder | 1.01e-09 | 3 |
gall bladder primordium | 1.01e-09 | 3 |
dermal papilla | 1.54e-09 | 3 |
papillary layer of dermis | 1.54e-09 | 3 |
left ovary | 1.59e-07 | 4 |