FFCP PHASE1:Hg19::chr19:17146840..17146843,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:17146840..17146843,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_at_chr19:17146840..17146843,- | |description=CAGE_peak_at_chr19:17146840..17146843,- | ||
|id=chr19:17146840..17146843,- | |id=chr19:17146840..17146843,- | ||
|ontology_enrichment_celltype=CL:0000764!5.47e-23!2;CL:0000765!5.47e-23!2;CL:0000050!5.47e-23!2;CL:0000038!5.47e-23!2;CL:0000558!5.47e-23!2;CL:0000547!5.47e-23!2;CL:0000549!5.47e-23!2;CL:0000550!5.47e-23!2;CL:0000552!5.47e-23!2 | |ontology_enrichment_celltype=CL:0000764!5.47e-23!2;CL:0000765!5.47e-23!2;CL:0000050!5.47e-23!2;CL:0000038!5.47e-23!2;CL:0000558!5.47e-23!2;CL:0000547!5.47e-23!2;CL:0000549!5.47e-23!2;CL:0000550!5.47e-23!2;CL:0000552!5.47e-23!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;4.09e-11;2!CL:0000558;4.09e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.09e-11,2;CL:0000765,4.09e-11,2;CL:0000050,4.09e-11,2;CL:0000038,4.09e-11,2;CL:0000558,4.09e-11,2;CL:0000547,4.09e-11,2;CL:0000549,4.09e-11,2;CL:0000550,4.09e-11,2;CL:0000552,4.09e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.54e-59!15;UBERON:0000179!1.54e-59!15;UBERON:0000463!1.54e-59!15;UBERON:0007023!1.47e-14!115;UBERON:0002390!6.03e-14!102;UBERON:0003061!6.03e-14!102;UBERON:0002193!1.46e-12!112;UBERON:0004535!3.56e-07!110;UBERON:0001009!5.93e-07!113;UBERON:0003081!8.32e-07!216 | |ontology_enrichment_uberon=UBERON:0000178!1.54e-59!15;UBERON:0000179!1.54e-59!15;UBERON:0000463!1.54e-59!15;UBERON:0007023!1.47e-14!115;UBERON:0002390!6.03e-14!102;UBERON:0003061!6.03e-14!102;UBERON:0002193!1.46e-12!112;UBERON:0004535!3.56e-07!110;UBERON:0001009!5.93e-07!113;UBERON:0003081!8.32e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.29e-106;15!UBERON:0000179;9.29e-106;15!UBERON:0000463;9.29e-106;15!UBERON:0002390;2.81e-45;32!UBERON:0002193;3.77e-25;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.30e-106,15;UBERON:0000179,9.30e-106,15;UBERON:0000463,9.30e-106,15;UBERON:0007023,5.86e-17,114;UBERON:0002390,7.63e-16,98;UBERON:0003061,7.63e-16,98;UBERON:0004535,2.35e-14,109;UBERON:0002193,2.35e-14,108;UBERON:0001009,5.85e-14,112;UBERON:0003081,1.95e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,1.5686127061494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,7.61171413848254,5.35246044999663,39.8753031021914,2.38231775457789,1.64544909234478,1.29694662238543,6.48037724685738,53.9325119880104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,1.5686127061494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,7.61171413848254,5.35246044999663,39.8753031021914,2.38231775457789,1.64544909234478,1.29694662238543,6.48037724685738,53.9325119880104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:17146840..17146843,- | |short_description=p@chr19:17146840..17146843,- | ||
}} | }} |
Latest revision as of 04:47, 26 July 2015
Short description: | p@chr19:17146840..17146843, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:17146840..17146843, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.09e-11 | 2 |
erythroblast | 4.09e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 4.09e-11 | 2 |
erythroid progenitor cell | 4.09e-11 | 2 |
reticulocyte | 4.09e-11 | 2 |
proerythroblast | 4.09e-11 | 2 |
basophilic erythroblast | 4.09e-11 | 2 |
polychromatophilic erythroblast | 4.09e-11 | 2 |
orthochromatic erythroblast | 4.09e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 9.30e-106 | 15 |
haemolymphatic fluid | 9.30e-106 | 15 |
organism substance | 9.30e-106 | 15 |
adult organism | 5.86e-17 | 114 |
hematopoietic system | 7.63e-16 | 98 |
blood island | 7.63e-16 | 98 |
cardiovascular system | 2.35e-14 | 109 |
hemolymphoid system | 2.35e-14 | 108 |
circulatory system | 5.85e-14 | 112 |
lateral plate mesoderm | 1.95e-07 | 203 |