FFCP PHASE1:Hg19::chr19:35890402..35890413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:35890402..35890413,+ | |||
|coexpression_cluster_id=C177 | |coexpression_cluster_id=C177 | ||
|description=CAGE_peak_at_chr19:35890402..35890413,+ | |description=CAGE_peak_at_chr19:35890402..35890413,+ | ||
|id=chr19:35890402..35890413,+ | |id=chr19:35890402..35890413,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.16e-26!10;CL:0000541!1.16e-26!10;CL:0002567!3.29e-23!3;CL:0000147!3.55e-19!14;CL:0000946!1.03e-17!1;CL:0000786!1.03e-17!1;CL:0000980!1.03e-17!1;CL:0002566!1.70e-17!1;CL:0000710!1.54e-13!20;CL:0000075!4.12e-10!27;CL:0000785!1.57e-09!2;CL:0000955!1.57e-09!2;CL:0000818!1.57e-09!2;CL:0000954!1.57e-09!2;CL:0000816!1.57e-09!2;CL:0002077!2.53e-08!33;CL:0000325!4.43e-07!39;CL:0000817!9.12e-07!3 | |ontology_enrichment_celltype=CL:0000148!1.16e-26!10;CL:0000541!1.16e-26!10;CL:0002567!3.29e-23!3;CL:0000147!3.55e-19!14;CL:0000946!1.03e-17!1;CL:0000786!1.03e-17!1;CL:0000980!1.03e-17!1;CL:0002566!1.70e-17!1;CL:0000710!1.54e-13!20;CL:0000075!4.12e-10!27;CL:0000785!1.57e-09!2;CL:0000955!1.57e-09!2;CL:0000818!1.57e-09!2;CL:0000954!1.57e-09!2;CL:0000816!1.57e-09!2;CL:0002077!2.53e-08!33;CL:0000325!4.43e-07!39;CL:0000817!9.12e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002567;3.66e-23;3!CL:0000148;6.34e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.27e-23,3;CL:0000148,6.13e-08,10;CL:0000541,6.13e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.31e-34!2 | |ontology_enrichment_disease=DOID:1909!1.31e-34!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;6.43e-131;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.99e-131,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.08e-18;15!UBERON:0007376;1.08e-18;15!UBERON:0010371;6.09e-10;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.13e-18,15;UBERON:0007376,1.13e-18,15;UBERON:0007383,1.13e-18,15;UBERON:0002097,1.47e-07,41;UBERON:0002199,7.52e-07,46;UBERON:0002416,7.52e-07,46 | |||
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|short_description=p@chr19:35890402..35890413,+ | |short_description=p@chr19:35890402..35890413,+ | ||
}} | }} |
Latest revision as of 06:43, 26 July 2015
Short description: | p@chr19:35890402..35890413, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:35890402..35890413, + |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.27e-23 | 3 |
melanocyte | 6.13e-08 | 10 |
melanoblast | 6.13e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.13e-18 | 15 |
outer epithelium | 1.13e-18 | 15 |
enveloping layer of ectoderm | 1.13e-18 | 15 |
skin of body | 1.47e-07 | 41 |
integument | 7.52e-07 | 46 |
integumental system | 7.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.99e-131 | 2 |