FFCP PHASE1:Hg19::chr19:4910094..4910138,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29128 | |EntrezGene=29128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=12556 | |HGNC=12556 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T88 | |UniProt=Q96T88 | ||
|association_with_transcript=-53bp_to_ENST00000455180,uc010duf.2_5end | |association_with_transcript=-53bp_to_ENST00000455180,uc010duf.2_5end | ||
|cluster_id=chr19:4910094..4910138,+ | |||
|coexpression_cluster_id=C3809 | |coexpression_cluster_id=C3809 | ||
|description=CAGE_peak_3_at_UHRF1_5end | |description=CAGE_peak_3_at_UHRF1_5end | ||
|id=chr19:4910094..4910138,+ | |id=chr19:4910094..4910138,+ | ||
|ontology_enrichment_celltype=CL:0000548!4.23e-15!679;CL:0000004!4.23e-15!679;CL:0000255!4.23e-15!679;CL:0000012!8.61e-15!682;CL:0000055!1.64e-11!180;CL:0000003!9.93e-11!722;CL:0000066!4.49e-10!254;CL:0000144!2.46e-09!625;CL:0002321!1.29e-08!248;CL:0000220!3.23e-08!246;CL:0000221!9.81e-08!71;CL:0000133!6.58e-07!59 | |ontology_enrichment_celltype=CL:0000548!4.23e-15!679;CL:0000004!4.23e-15!679;CL:0000255!4.23e-15!679;CL:0000012!8.61e-15!682;CL:0000055!1.64e-11!180;CL:0000003!9.93e-11!722;CL:0000066!4.49e-10!254;CL:0000144!2.46e-09!625;CL:0002321!1.29e-08!248;CL:0000220!3.23e-08!246;CL:0000221!9.81e-08!71;CL:0000133!6.58e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.77e-08;15!CL:1000507;2.51e-07;10!CL:1000494;2.51e-07;10!CL:0002681;6.30e-07;12!CL:0002584;6.30e-07;12!CL:1000497;8.28e-07;17!CL:0002518;8.28e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.82e-08,15;CL:1000507,3.35e-07,10;CL:1000494,3.35e-07,10;CL:0000221,3.90e-07,72;CL:0002681,6.79e-07,12;CL:0002584,6.79e-07,12;CL:1000497,8.38e-07,17;CL:0002518,8.38e-07,17;CL:0000133,8.43e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.85e-20!235;DOID:14566!6.91e-20!239;DOID:2531!1.06e-15!51;DOID:0060083!1.06e-15!51;DOID:1240!5.47e-15!39;DOID:8692!2.39e-13!31;DOID:0050686!3.66e-11!137;DOID:0050687!5.87e-07!143 | |ontology_enrichment_disease=DOID:162!4.85e-20!235;DOID:14566!6.91e-20!239;DOID:2531!1.06e-15!51;DOID:0060083!1.06e-15!51;DOID:1240!5.47e-15!39;DOID:8692!2.39e-13!31;DOID:0050686!3.66e-11!137;DOID:0050687!5.87e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.80e-15;31!DOID:1240;5.67e-14;39!DOID:2531;3.93e-11;51!DOID:0060083;3.93e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.33e-18,39;DOID:2531,1.84e-17,51;DOID:0060083,1.84e-17,51;DOID:8692,5.44e-16,31;DOID:162,3.58e-13,235;DOID:14566,6.31e-13,239;DOID:0050686,7.40e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0001801!6.79e-08!14;UBERON:0000019!1.25e-07!19;UBERON:0000047!1.25e-07!19;UBERON:0004088!1.25e-07!19;UBERON:0003072!1.25e-07!19;UBERON:0003071!1.25e-07!19;UBERON:0004128!1.25e-07!19;UBERON:0001456!9.26e-07!21;UBERON:0005085!9.87e-07!29 | |ontology_enrichment_uberon=UBERON:0001801!6.79e-08!14;UBERON:0000019!1.25e-07!19;UBERON:0000047!1.25e-07!19;UBERON:0004088!1.25e-07!19;UBERON:0003072!1.25e-07!19;UBERON:0003071!1.25e-07!19;UBERON:0004128!1.25e-07!19;UBERON:0001456!9.26e-07!21;UBERON:0005085!9.87e-07!29 | ||
|ontology_enrichment_uberon_v019=UBERON:0001801;1.54e-08;14!UBERON:0006555;1.77e-08;15!UBERON:0004819;1.77e-08;15!UBERON:0001285;1.77e-08;15!UBERON:0007684;1.77e-08;15!UBERON:0000019;4.39e-08;19!UBERON:0000047;4.39e-08;19!UBERON:0004088;4.39e-08;19!UBERON:0010230;4.39e-08;19!UBERON:0001851;1.00e-07;15!UBERON:0001456;1.95e-07;21!UBERON:0000970;2.37e-07;20!UBERON:0004211;2.51e-07;10!UBERON:0009773;2.51e-07;10!UBERON:0001231;2.51e-07;10!UBERON:0004810;2.51e-07;10!UBERON:0001225;6.30e-07;12!UBERON:0008987;6.30e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001801,1.37e-08,14;UBERON:0004211,1.82e-08,15;UBERON:0009773,1.82e-08,15;UBERON:0001231,1.82e-08,15;UBERON:0001285,1.82e-08,15;UBERON:0007684,1.82e-08,15;UBERON:0004208,1.82e-08,15;UBERON:0001851,5.52e-08,15;UBERON:0006555,1.41e-07,16;UBERON:0004819,1.41e-07,16;UBERON:0000019,1.52e-07,20;UBERON:0000047,1.52e-07,20;UBERON:0010312,1.52e-07,20;UBERON:0004088,1.52e-07,20;UBERON:0010230,1.52e-07,20;UBERON:0003072,1.52e-07,20;UBERON:0004128,1.52e-07,20;UBERON:0003071,1.52e-07,20;UBERON:0004810,3.35e-07,10;UBERON:0001456,5.81e-07,22;UBERON:0001225,6.79e-07,12;UBERON:0008987,6.79e-07,12;UBERON:0000970,7.03e-07,21;UBERON:0002104,7.03e-07,21 | |||
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| ||
|short_description=p3@UHRF1 | |short_description=p3@UHRF1 | ||
}} | }} |
Latest revision as of 03:06, 19 September 2015
Short description: | p3@UHRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UHRF1_5end |
Coexpression cluster: | C3809_granulocyte_Astrocyte_Trabecular_acute_Meningeal_Renal_Myoblast |
Association with transcript: | -53bp_to_ENST00000455180, uc010duf.2_5end |
EntrezGene: | UHRF1 |
HGNC: | 12556 |
UniProt: | Q96T88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.82e-08 | 15 |
kidney tubule cell | 3.35e-07 | 10 |
nephron tubule epithelial cell | 3.35e-07 | 10 |
ectodermal cell | 3.90e-07 | 72 |
kidney cortical cell | 6.79e-07 | 12 |
renal cortical epithelial cell | 6.79e-07 | 12 |
kidney cell | 8.38e-07 | 17 |
kidney epithelial cell | 8.38e-07 | 17 |
neurectodermal cell | 8.43e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
anterior segment of eyeball | 1.37e-08 | 14 |
nephron epithelium | 1.82e-08 | 15 |
renal tubule | 1.82e-08 | 15 |
nephron tubule | 1.82e-08 | 15 |
nephron | 1.82e-08 | 15 |
uriniferous tubule | 1.82e-08 | 15 |
nephrogenic mesenchyme | 1.82e-08 | 15 |
cortex | 5.52e-08 | 15 |
excretory tube | 1.41e-07 | 16 |
kidney epithelium | 1.41e-07 | 16 |
camera-type eye | 1.52e-07 | 20 |
simple eye | 1.52e-07 | 20 |
immature eye | 1.52e-07 | 20 |
ocular region | 1.52e-07 | 20 |
eyeball of camera-type eye | 1.52e-07 | 20 |
optic cup | 1.52e-07 | 20 |
optic vesicle | 1.52e-07 | 20 |
eye primordium | 1.52e-07 | 20 |
nephron tubule epithelium | 3.35e-07 | 10 |
face | 5.81e-07 | 22 |
cortex of kidney | 6.79e-07 | 12 |
renal parenchyma | 6.79e-07 | 12 |
eye | 7.03e-07 | 21 |
visual system | 7.03e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.33e-18 | 39 |
hematologic cancer | 1.84e-17 | 51 |
immune system cancer | 1.84e-17 | 51 |
myeloid leukemia | 5.44e-16 | 31 |
cancer | 3.58e-13 | 235 |
disease of cellular proliferation | 6.31e-13 | 239 |
organ system cancer | 7.40e-08 | 137 |