FFCP PHASE1:Hg19::chr1:154178834..154178835,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388701 | |EntrezGene=388701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32305 | |HGNC=32305 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VU69 | |UniProt=Q5VU69 | ||
|association_with_transcript=-25bp_to_ENST00000368525,NM_001010979,uc001fee.1_5end | |association_with_transcript=-25bp_to_ENST00000368525,NM_001010979,uc001fee.1_5end | ||
|cluster_id=chr1:154178834..154178835,- | |||
|coexpression_cluster_id=C111 | |coexpression_cluster_id=C111 | ||
|description=CAGE_peak_4_at_C1orf189_5end | |description=CAGE_peak_4_at_C1orf189_5end | ||
|id=chr1:154178834..154178835,- | |id=chr1:154178834..154178835,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.87e-11;10!UBERON:0005564;2.87e-11;10 | |||
|ontology_enrichment_disease=DOID:4468!2.15e-08!2 | |ontology_enrichment_disease=DOID:4468!2.15e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!9.99e-16!1;UBERON:0006518!9.99e-16!1;UBERON:0008949!9.99e-16!1;UBERON:0000101!9.99e-16!1;UBERON:0002167!9.99e-16!1;UBERON:0002336!3.17e-15!1;UBERON:0001018!3.17e-15!1;UBERON:0002473!3.17e-15!1;UBERON:0005340!3.17e-15!1;UBERON:0002316!3.17e-15!1;UBERON:0003544!3.17e-15!1;UBERON:0001020!3.17e-15!1;UBERON:0005970!3.17e-15!1;UBERON:0002437!3.17e-15!1;UBERON:0007023!2.67e-11!115;UBERON:0003127!1.20e-08!2;UBERON:0000341!2.00e-08!2;UBERON:0001897!2.48e-08!2;UBERON:0005162!2.87e-08!2;UBERON:0000122!2.87e-08!2;UBERON:0000473!3.77e-08!8;UBERON:0005178!5.11e-07!34;UBERON:0002224!5.11e-07!34;UBERON:0005181!8.02e-07!35 | |ontology_enrichment_uberon=UBERON:0002171!9.99e-16!1;UBERON:0006518!9.99e-16!1;UBERON:0008949!9.99e-16!1;UBERON:0000101!9.99e-16!1;UBERON:0002167!9.99e-16!1;UBERON:0002336!3.17e-15!1;UBERON:0001018!3.17e-15!1;UBERON:0002473!3.17e-15!1;UBERON:0005340!3.17e-15!1;UBERON:0002316!3.17e-15!1;UBERON:0003544!3.17e-15!1;UBERON:0001020!3.17e-15!1;UBERON:0005970!3.17e-15!1;UBERON:0002437!3.17e-15!1;UBERON:0007023!2.67e-11!115;UBERON:0003127!1.20e-08!2;UBERON:0000341!2.00e-08!2;UBERON:0001897!2.48e-08!2;UBERON:0005162!2.87e-08!2;UBERON:0000122!2.87e-08!2;UBERON:0000473!3.77e-08!8;UBERON:0005178!5.11e-07!34;UBERON:0002224!5.11e-07!34;UBERON:0005181!8.02e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.52e-50;2!UBERON:0003126;1.78e-15;7!UBERON:0001005;1.78e-15;7!UBERON:0000473;1.00e-13;8!UBERON:0003135;2.27e-10;11!UBERON:0007196;5.74e-08;15!UBERON:0001558;5.74e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.74e-50,2;UBERON:0003126,1.65e-15,7;UBERON:0001005,1.65e-15,7;UBERON:0000473,1.07e-13,8;UBERON:0003135,2.37e-10,11;UBERON:0007196,5.55e-08,15;UBERON:0001558,5.55e-08,15 | |||
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|short_description=p4@C1orf189 | |short_description=p4@C1orf189 | ||
}} | }} |
Latest revision as of 08:32, 17 September 2015
Short description: | p4@C1orf189 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C1orf189_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | -25bp_to_ENST00000368525, NM_001010979, uc001fee.1_5end |
EntrezGene: | C1orf189 |
HGNC: | 32305 |
UniProt: | Q5VU69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.74e-50 | 2 |
trachea | 1.65e-15 | 7 |
respiratory airway | 1.65e-15 | 7 |
testis | 1.07e-13 | 8 |
male reproductive organ | 2.37e-10 | 11 |
tracheobronchial tree | 5.55e-08 | 15 |
lower respiratory tract | 5.55e-08 | 15 |