FFCP PHASE1:Hg19::chr1:36235532..36235543,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63967 | |EntrezGene=63967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19715 | |HGNC=19715 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HAW4,E7ESG2 | |UniProt=Q9HAW4,E7ESG2 | ||
|association_with_transcript=-3bp_to_ENST00000318121,ENST00000373220,ENST00000520551_5end | |association_with_transcript=-3bp_to_ENST00000318121,ENST00000373220,ENST00000520551_5end | ||
|cluster_id=chr1:36235532..36235543,- | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_3_at_CLSPN_5end | |description=CAGE_peak_3_at_CLSPN_5end | ||
|id=chr1:36235532..36235543,- | |id=chr1:36235532..36235543,- | ||
|ontology_enrichment_celltype=CL:0000548!5.56e-11!679;CL:0000004!5.56e-11!679;CL:0000255!5.56e-11!679;CL:0000012!8.70e-11!682;CL:0000066!1.18e-08!254;CL:0000003!9.76e-08!722 | |ontology_enrichment_celltype=CL:0000548!5.56e-11!679;CL:0000004!5.56e-11!679;CL:0000255!5.56e-11!679;CL:0000012!8.70e-11!682;CL:0000066!1.18e-08!254;CL:0000003!9.76e-08!722 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.90e-07;29 | |||
|ontology_enrichment_disease=DOID:162!1.11e-45!235;DOID:14566!1.79e-44!239;DOID:0050687!1.37e-23!143;DOID:0050686!2.99e-20!137;DOID:305!1.76e-19!106;DOID:2531!5.01e-17!51;DOID:0060083!5.01e-17!51;DOID:1240!2.65e-14!39;DOID:8692!3.56e-12!31 | |ontology_enrichment_disease=DOID:162!1.11e-45!235;DOID:14566!1.79e-44!239;DOID:0050687!1.37e-23!143;DOID:0050686!2.99e-20!137;DOID:305!1.76e-19!106;DOID:2531!5.01e-17!51;DOID:0060083!5.01e-17!51;DOID:1240!2.65e-14!39;DOID:8692!3.56e-12!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.17e-12;31!DOID:1240;9.11e-11;39!DOID:2531;5.64e-10;51!DOID:0060083;5.64e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.02e-32,235;DOID:14566,3.00e-31,239;DOID:0050687,2.18e-16,143;DOID:2531,1.09e-15,51;DOID:0060083,1.09e-15,51;DOID:0050686,2.68e-15,137;DOID:305,3.77e-14,106;DOID:1240,1.50e-13,39;DOID:8692,2.97e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.35e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!6.35e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.98e-11;9!UBERON:0001557;1.98e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.34e-12,9;UBERON:0001557,3.51e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.492484232307152,0,0,0.572471974262113,0.821246550437305,0.627713197974014,0.687720651731561,0.985207073399349,0.787107813136792,0,0,0,0,0,0,2.55641761914995,0.568676929949686,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0.512365278902701,0,0.328875809207352,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.283604451492204,0.886917589850256,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0.835979866147242,0.258416759169329,0,0.33472061276467,0,0,0,1.10298924103761,0,0.714397826272638,0.898117490504679,1.23872628531654,0,0.949265659568129,0,0,0,0,0,0.379891534993739,0,0.573673241497627,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0.149448680551801,1.05691048779388,0.161872944368132,0.702254033511242,1.22492502752936,0.737005903870608,0,0,0,0,0,1.0100166837244,1.12606667884768,1.38532057742091,1.31693286264251,0,0.150238058906597,0.567160915800105,1.25572744982203,0,0.211931901159562,0.900273288253207,0.309157587715317,0.515281080091258,0.18611685633159,2.19409231913646,0.389748020644795,0.504867548488229,0.0920498986422993,0.161646056818812,0,1.0075209822764,0.67824236924195,0.386521706326594,0,0.286804595389004,0.243947412259191,1.06023814657188,0.464775771478074,0.414644220061482,0.252320850875628,0.72995471815166,0,0,0,0,0,1.30137480043828,1.68584690078102,2.16909926895134,1.7647035637183,0.653638332277218,2.13543557199987,1.21348177344148,2.35465758150415,1.53898862778556,0,0,0,0,0,0,0,3.97316789473185,0.491953754172454,0.514703430895577,0.109750285408626,0,0.201057944823262,0,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0.891786973732369,0,0,0.283550194484773,0.268675568108545,0.290633938513962,0,0.492663237895943,0.352193736052904,0,0.144119953416961,0,2.22242630022592,0,0,0,0.616964956219941,0.300343057843917,0.571652865261156,0.560655421726804,0,1.7601188597028,0,0,0,0,0,1.02882949704857,0,0.532844358032199,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0.579125226670317,0,1.07436577943937,0.784596007954691,0,0,0.128343036279748,0.76228387266739,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,0.781952530212746,0,0,0,0,0.213455115606889,0.606255142892519,0,0.30239029332968,0,0.306923946576125,0,0,0,0,0,0.616838775210622,0.177561725313127,0.657017248110473,0.519254429183621,1.04589340613963,0.604297247958111,0,0.0920809889358963,0.574072240823034,0.910455840033585,0,0,0.385076685522074,0,0,0.211103257785751,0,0.340187410553031,1.72732732881711,0,0,0,0.764628819135115,0,0,4.60445740956463,3.13722541229881,1.28225062558195,0,0,0,1.19040304263846,1.56768049849117,0,0,0,0,0.462145851343933,0.767518373630648,0.551346289938122,0,0.435050081742686,1.27839941124151,0.178064071293475,0,0,0.255225424989168,0,0,0,1.3940745403212,0,0,0,0,0,0.744316738719335,1.2655176988749,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.539617372749944,0.54907405947211,0.589062011728432,0,0,0.421258456238981,0,0.243713489631284,0,0.682499557039929,0.141405431953713,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0.281695602532241,1.00387946542836,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.854592569019785,0,0.980160863924127,0.929015875628594,1.00988449083511,1.42283686696828,1.59426272728822,1.99579371432817,0.766021480529467,0.635020748171649,0.649243880549111,0.842391534340376,0.456469358066384,0.626719583092093,0,0.338583555603207,1.2847046008296,1.21079824314629,2.12923118845163,1.03051603426729,1.22896305723383,2.23676107892416,1.50164227540718,0.781552381608161,1.9488432172667,1.23087398947712,1.35227839237992,2.66457574398256,2.81974010175699,0,0.146508179271894,0.36408156524854,0.891547074219827,0.568272293612826,0.47748896947538,0,0.307160702099232,0,0,0.111308705022906,0.659215496907038,2.95575571379191,0,0,0.251932747854276,1.1249555075237,0.246169610922139,0,0.898683511473268,0.179021174675609,0,0,0,2.22273980289274,0,0,0,0.260427761085233,0.0874599999961957,0,0.227586896570999,0.254253650292766,0.236387681767936,2.06846023944879,0.583209226766509,2.60437492399938,0,0,0,0,0,0,0.871507708151921,0.139423744278603,0,0.797594390929008,0.46112780877612,0.538545866458633,0.108647371922008,0,0.274792780205587,0,0,0.156980256395025,0.498635045700469,1.57916962432026,0.588187602953219,1.00692952185506,1.3282761290693,1.27149263184303,0,0.65293123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| ||
|short_description=p3@CLSPN | |short_description=p3@CLSPN | ||
}} | }} |
Latest revision as of 19:48, 17 September 2015
Short description: | p3@CLSPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLSPN_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | -3bp_to_ENST00000318121, ENST00000373220, ENST00000520551_5end |
EntrezGene: | CLSPN |
HGNC: | 19715 |
UniProt: | Q9HAW4E7ESG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 7.34e-12 | 9 |
upper respiratory tract | 3.51e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.02e-32 | 235 |
disease of cellular proliferation | 3.00e-31 | 239 |
cell type cancer | 2.18e-16 | 143 |
hematologic cancer | 1.09e-15 | 51 |
immune system cancer | 1.09e-15 | 51 |
organ system cancer | 2.68e-15 | 137 |
carcinoma | 3.77e-14 | 106 |
leukemia | 1.50e-13 | 39 |
myeloid leukemia | 2.97e-13 | 31 |