FFCP PHASE1:Hg19::chr1:54303949..54303979,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55706 | |EntrezGene=55706 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25525 | |HGNC=25525 | ||
|TSSclassifier=strong | |||
|UniProt=G3XA81 | |UniProt=G3XA81 | ||
|association_with_transcript=0bp_to_ENST00000234725_5end | |association_with_transcript=0bp_to_ENST00000234725_5end | ||
|cluster_id=chr1:54303949..54303979,- | |||
|coexpression_cluster_id=C896 | |coexpression_cluster_id=C896 | ||
|description=CAGE_peak_1_at_TMEM48_5end | |description=CAGE_peak_1_at_TMEM48_5end | ||
|id=chr1:54303949..54303979,- | |id=chr1:54303949..54303979,- | ||
|ontology_enrichment_celltype=CL:0000066!1.57e-14!254;CL:0000548!2.70e-12!679;CL:0000004!2.70e-12!679;CL:0000255!2.70e-12!679;CL:0000012!6.54e-12!682;CL:0000063!5.15e-08!578;CL:0000003!8.50e-08!722 | |ontology_enrichment_celltype=CL:0000066!1.57e-14!254;CL:0000548!2.70e-12!679;CL:0000004!2.70e-12!679;CL:0000255!2.70e-12!679;CL:0000012!6.54e-12!682;CL:0000063!5.15e-08!578;CL:0000003!8.50e-08!722 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.17e-15,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.08e-46!235;DOID:14566!4.72e-46!239;DOID:0050687!2.00e-23!143;DOID:305!1.22e-20!106;DOID:2531!2.20e-20!51;DOID:0060083!2.20e-20!51;DOID:0050686!3.61e-20!137;DOID:1240!6.71e-16!39;DOID:8692!3.22e-12!31 | |ontology_enrichment_disease=DOID:162!1.08e-46!235;DOID:14566!4.72e-46!239;DOID:0050687!2.00e-23!143;DOID:305!1.22e-20!106;DOID:2531!2.20e-20!51;DOID:0060083!2.20e-20!51;DOID:0050686!3.61e-20!137;DOID:1240!6.71e-16!39;DOID:8692!3.22e-12!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;9.91e-13;39!DOID:2531;2.86e-12;51!DOID:0060083;2.86e-12;51!DOID:8692;9.01e-12;31!DOID:305;3.92e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.08e-46,235;DOID:14566,4.72e-46,239;DOID:0050687,2.00e-23,143;DOID:305,1.22e-20,106;DOID:2531,2.20e-20,51;DOID:0060083,2.20e-20,51;DOID:0050686,3.61e-20,137;DOID:1240,6.71e-16,39;DOID:8692,3.22e-12,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@TMEM48 | |short_description=p1@TMEM48 | ||
}} | }} |
Latest revision as of 14:03, 18 September 2015
Short description: | p1@TMEM48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM48_5end |
Coexpression cluster: | C896_retinoblastoma_iPS_acute_lymphoma_chronic_Burkitt_testicular |
Association with transcript: | 0bp_to_ENST00000234725_5end |
EntrezGene: | TMEM48 |
HGNC: | 25525 |
UniProt: | G3XA81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.17e-15 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.08e-46 | 235 |
disease of cellular proliferation | 4.72e-46 | 239 |
cell type cancer | 2.00e-23 | 143 |
carcinoma | 1.22e-20 | 106 |
hematologic cancer | 2.20e-20 | 51 |
immune system cancer | 2.20e-20 | 51 |
organ system cancer | 3.61e-20 | 137 |
leukemia | 6.71e-16 | 39 |
myeloid leukemia | 3.22e-12 | 31 |