FFCP PHASE1:Hg19::chr1:62902687..62902806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7398 | |EntrezGene=7398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12607 | |HGNC=12607 | ||
|TSSclassifier=strong | |||
|UniProt=O94782 | |UniProt=O94782 | ||
|association_with_transcript=304bp_to_NM_003368,uc001dal.1_5end | |association_with_transcript=304bp_to_NM_003368,uc001dal.1_5end | ||
|cluster_id=chr1:62902687..62902806,+ | |||
|coexpression_cluster_id=C2596 | |coexpression_cluster_id=C2596 | ||
|description=CAGE_peak_1_at_USP1_5end | |description=CAGE_peak_1_at_USP1_5end | ||
|id=chr1:62902687..62902806,+ | |id=chr1:62902687..62902806,+ | ||
|ontology_enrichment_celltype=CL:0000542!6.78e-14!53;CL:0000051!6.78e-14!53;CL:0000838!2.34e-13!52;CL:0000945!6.62e-09!24;CL:0000826!6.62e-09!24 | |ontology_enrichment_celltype=CL:0000542!6.78e-14!53;CL:0000051!6.78e-14!53;CL:0000838!2.34e-13!52;CL:0000945!6.62e-09!24;CL:0000826!6.62e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.32e-09;24!CL:0000542;1.67e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.78e-14,53;CL:0000051,6.78e-14,53;CL:0000838,2.34e-13,52;CL:0000945,6.62e-09,24;CL:0000826,6.62e-09,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.67e-08;53 | |||
|ontology_enrichment_disease=DOID:162!3.16e-54!235;DOID:14566!4.83e-52!239;DOID:0050687!2.44e-31!143;DOID:305!4.79e-24!106;DOID:0050686!5.62e-23!137;DOID:2531!3.18e-19!51;DOID:0060083!3.18e-19!51;DOID:1240!1.27e-15!39;DOID:8692!1.13e-11!31;DOID:3095!3.26e-07!22;DOID:2994!3.26e-07!22 | |ontology_enrichment_disease=DOID:162!3.16e-54!235;DOID:14566!4.83e-52!239;DOID:0050687!2.44e-31!143;DOID:305!4.79e-24!106;DOID:0050686!5.62e-23!137;DOID:2531!3.18e-19!51;DOID:0060083!3.18e-19!51;DOID:1240!1.27e-15!39;DOID:8692!1.13e-11!31;DOID:3095!3.26e-07!22;DOID:2994!3.26e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.36e-12;39!DOID:2531;5.17e-12;51!DOID:0060083;5.17e-12;51!DOID:8692;2.37e-11;31!DOID:0050687;8.95e-08;143!DOID:305;1.33e-07;106!DOID:3095;3.59e-07;22!DOID:2994;3.59e-07;22!DOID:14566;3.60e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.16e-54,235;DOID:14566,4.73e-52,239;DOID:0050687,2.44e-31,143;DOID:305,4.79e-24,106;DOID:0050686,5.62e-23,137;DOID:2531,3.18e-19,51;DOID:0060083,3.18e-19,51;DOID:1240,1.27e-15,39;DOID:8692,1.13e-11,31;DOID:3095,3.26e-07,22;DOID:2994,3.26e-07,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@USP1 | |short_description=p1@USP1 | ||
}} | }} |
Latest revision as of 20:05, 18 September 2015
Short description: | p1@USP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP1_5end |
Coexpression cluster: | C2596_granulocyte_osteosarcoma_rhabdomyosarcoma_embryonic_acute_Saos2_non |
Association with transcript: | 304bp_to_NM_003368, uc001dal.1_5end |
EntrezGene: | USP1 |
HGNC: | 12607 |
UniProt: | O94782 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.78e-14 | 53 |
common lymphoid progenitor | 6.78e-14 | 53 |
lymphoid lineage restricted progenitor cell | 2.34e-13 | 52 |
lymphocyte of B lineage | 6.62e-09 | 24 |
pro-B cell | 6.62e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.16e-54 | 235 |
disease of cellular proliferation | 4.73e-52 | 239 |
cell type cancer | 2.44e-31 | 143 |
carcinoma | 4.79e-24 | 106 |
organ system cancer | 5.62e-23 | 137 |
hematologic cancer | 3.18e-19 | 51 |
immune system cancer | 3.18e-19 | 51 |
leukemia | 1.27e-15 | 39 |
myeloid leukemia | 1.13e-11 | 31 |
germ cell and embryonal cancer | 3.26e-07 | 22 |
germ cell cancer | 3.26e-07 | 22 |