FFCP PHASE1:Hg19::chr20:15967691..15967705,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:15967691..15967705,+ | |||
|coexpression_cluster_id=C117 | |coexpression_cluster_id=C117 | ||
|description=CAGE_peak_at_chr20:15967691..15967705,+ | |description=CAGE_peak_at_chr20:15967691..15967705,+ | ||
|id=chr20:15967691..15967705,+ | |id=chr20:15967691..15967705,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.31e-14!24;CL:0000826!2.31e-14!24;CL:0000838!7.34e-09!52;CL:0000542!1.18e-08!53;CL:0000051!1.18e-08!53 | |ontology_enrichment_celltype=CL:0000945!2.31e-14!24;CL:0000826!2.31e-14!24;CL:0000838!7.34e-09!52;CL:0000542!1.18e-08!53;CL:0000051!1.18e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.61e-13;1!CL:0000946;2.18e-13;1!CL:0000786;2.18e-13;1!CL:0000945;3.60e-12;24!CL:0000159;2.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.61e-13,1;CL:0000946,2.32e-13,1;CL:0000786,2.32e-13,1;CL:0000980,2.32e-13,1;CL:0000945,4.20e-12,24;CL:0000826,4.20e-12,24;CL:0000838,1.87e-10,52;CL:0000542,3.03e-10,53;CL:0000051,3.03e-10,53;CL:0000159,2.15e-07,2;CL:0000785,2.58e-07,2;CL:0000955,2.58e-07,2;CL:0000818,2.58e-07,2;CL:0000954,2.58e-07,2;CL:0000816,2.58e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;2.50e-07;2 | |||
|ontology_enrichment_disease=DOID:4468!8.15e-11!2 | |ontology_enrichment_disease=DOID:4468!8.15e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;2.20e-24;2!DOID:2152;1.61e-13;1!DOID:299;1.13e-11;25!DOID:120;3.24e-07;27!DOID:3493;4.55e-07;2!DOID:193;9.95e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.08e-24,2;DOID:2152,1.61e-13,1;DOID:299,9.79e-12,25;DOID:120,3.03e-07,27;DOID:3493,3.93e-07,2;DOID:193,9.35e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.29e-33!20;UBERON:0002619!1.89e-30!22;UBERON:0001869!2.60e-27!32;UBERON:0000956!1.30e-26!25;UBERON:0000203!1.30e-26!25;UBERON:0001893!1.47e-25!34;UBERON:0002780!1.05e-23!41;UBERON:0001890!1.05e-23!41;UBERON:0006240!1.05e-23!41;UBERON:0003080!4.53e-23!42;UBERON:0002791!6.46e-23!33;UBERON:0002020!3.57e-22!34;UBERON:0003528!3.57e-22!34;UBERON:0000200!9.50e-19!6;UBERON:0001049!3.55e-16!57;UBERON:0005068!3.55e-16!57;UBERON:0006241!3.55e-16!57;UBERON:0007135!3.55e-16!57;UBERON:0002616!1.62e-15!59;UBERON:0002021!3.71e-15!5;UBERON:0003056!6.66e-15!61;UBERON:0000955!2.11e-14!69;UBERON:0006238!2.11e-14!69;UBERON:0002771!2.12e-14!3;UBERON:0001017!3.27e-13!82;UBERON:0005743!1.98e-12!86;UBERON:0007023!2.63e-12!115;UBERON:0003075!4.61e-11!86;UBERON:0007284!4.61e-11!86;UBERON:0000073!6.57e-11!94;UBERON:0001016!6.57e-11!94;UBERON:0002346!2.05e-10!90;UBERON:0001871!2.41e-09!7;UBERON:0000153!4.65e-09!129;UBERON:0007811!4.65e-09!129;UBERON:0000033!1.31e-08!123;UBERON:0001872!1.50e-08!5;UBERON:0002106!3.44e-07!3;UBERON:0004854!3.44e-07!3;UBERON:0009034!3.44e-07!3;UBERON:0002095!3.44e-07!3;UBERON:0004782!3.44e-07!3;UBERON:0003281!3.44e-07!3;UBERON:0009664!3.44e-07!3;UBERON:0002296!3.44e-07!3;UBERON:0005602!3.44e-07!3;UBERON:0001179!3.44e-07!3;UBERON:0006293!3.44e-07!3 | |ontology_enrichment_uberon=UBERON:0001950!1.29e-33!20;UBERON:0002619!1.89e-30!22;UBERON:0001869!2.60e-27!32;UBERON:0000956!1.30e-26!25;UBERON:0000203!1.30e-26!25;UBERON:0001893!1.47e-25!34;UBERON:0002780!1.05e-23!41;UBERON:0001890!1.05e-23!41;UBERON:0006240!1.05e-23!41;UBERON:0003080!4.53e-23!42;UBERON:0002791!6.46e-23!33;UBERON:0002020!3.57e-22!34;UBERON:0003528!3.57e-22!34;UBERON:0000200!9.50e-19!6;UBERON:0001049!3.55e-16!57;UBERON:0005068!3.55e-16!57;UBERON:0006241!3.55e-16!57;UBERON:0007135!3.55e-16!57;UBERON:0002616!1.62e-15!59;UBERON:0002021!3.71e-15!5;UBERON:0003056!6.66e-15!61;UBERON:0000955!2.11e-14!69;UBERON:0006238!2.11e-14!69;UBERON:0002771!2.12e-14!3;UBERON:0001017!3.27e-13!82;UBERON:0005743!1.98e-12!86;UBERON:0007023!2.63e-12!115;UBERON:0003075!4.61e-11!86;UBERON:0007284!4.61e-11!86;UBERON:0000073!6.57e-11!94;UBERON:0001016!6.57e-11!94;UBERON:0002346!2.05e-10!90;UBERON:0001871!2.41e-09!7;UBERON:0000153!4.65e-09!129;UBERON:0007811!4.65e-09!129;UBERON:0000033!1.31e-08!123;UBERON:0001872!1.50e-08!5;UBERON:0002106!3.44e-07!3;UBERON:0004854!3.44e-07!3;UBERON:0009034!3.44e-07!3;UBERON:0002095!3.44e-07!3;UBERON:0004782!3.44e-07!3;UBERON:0003281!3.44e-07!3;UBERON:0009664!3.44e-07!3;UBERON:0002296!3.44e-07!3;UBERON:0005602!3.44e-07!3;UBERON:0001179!3.44e-07!3;UBERON:0006293!3.44e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.61e-13;1!UBERON:0002021;3.58e-10;5!UBERON:0004909;2.15e-07;2!UBERON:0002771;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.61e-13,1;UBERON:0002021,4.32e-10,5;UBERON:0004909,2.15e-07,2;UBERON:0002771,4.17e-07,2 | |||
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|short_description=p@chr20:15967691..15967705,+ | |short_description=p@chr20:15967691..15967705,+ | ||
}} | }} |
Latest revision as of 12:02, 28 July 2015
Short description: | p@chr20:15967691..15967705, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:15967691..15967705, + |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.61e-13 | 1 |
antibody secreting cell | 2.32e-13 | 1 |
plasma cell | 2.32e-13 | 1 |
plasmablast | 2.32e-13 | 1 |
lymphocyte of B lineage | 4.20e-12 | 24 |
pro-B cell | 4.20e-12 | 24 |
lymphoid lineage restricted progenitor cell | 1.87e-10 | 52 |
lymphocyte | 3.03e-10 | 53 |
common lymphoid progenitor | 3.03e-10 | 53 |
seromucus secreting cell | 2.15e-07 | 2 |
mature B cell | 2.58e-07 | 2 |
pre-B-II cell | 2.58e-07 | 2 |
transitional stage B cell | 2.58e-07 | 2 |
small pre-B-II cell | 2.58e-07 | 2 |
immature B cell | 2.58e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.61e-13 | 1 |
occipital lobe | 4.32e-10 | 5 |
epithelium of gonad | 2.15e-07 | 2 |
middle temporal gyrus | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.08e-24 | 2 |
ovary epithelial cancer | 1.61e-13 | 1 |
adenocarcinoma | 9.79e-12 | 25 |
female reproductive organ cancer | 3.03e-07 | 27 |
signet ring cell adenocarcinoma | 3.93e-07 | 2 |
reproductive organ cancer | 9.35e-07 | 29 |