FFCP PHASE1:Hg19::chr22:23227835..23227842,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:23227835..23227842,+ | |||
|coexpression_cluster_id=C218 | |coexpression_cluster_id=C218 | ||
|description=CAGE_peak_at_chr22:23227835..23227842,+ | |description=CAGE_peak_at_chr22:23227835..23227842,+ | ||
|id=chr22:23227835..23227842,+ | |id=chr22:23227835..23227842,+ | ||
|ontology_enrichment_celltype=CL:0000945!7.63e-17!24;CL:0000826!7.63e-17!24;CL:0000236!5.01e-15!14;CL:0002619!8.06e-07!3;CL:0000838!9.35e-07!52 | |ontology_enrichment_celltype=CL:0000945!7.63e-17!24;CL:0000826!7.63e-17!24;CL:0000236!5.01e-15!14;CL:0002619!8.06e-07!3;CL:0000838!9.35e-07!52 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.66e-18;1!UBERON:0006298;3.44e-18;1!UBERON:0009143;9.48e-18;1!UBERON:0006595;1.76e-09;86 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.84e-24!115 | |ontology_enrichment_uberon=UBERON:0007023!7.84e-24!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.36e-20;33!UBERON:0001154;2.66e-18;1!UBERON:0001153;2.66e-18;1!UBERON:0009854;2.66e-18;1!UBERON:0002372;3.44e-18;1!UBERON:0001736;3.44e-18;1!UBERON:0001961;3.44e-18;1!UBERON:0001744;3.44e-18;1!UBERON:0001042;3.44e-18;1!UBERON:0001735;3.44e-18;1!UBERON:0000029;9.48e-18;1!UBERON:0001044;3.54e-12;6!UBERON:0003293;3.54e-12;6!UBERON:0003294;3.54e-12;6!UBERON:0010047;3.54e-12;6!UBERON:0003408;3.54e-12;6!UBERON:0000167;3.54e-12;6!UBERON:0001041;2.36e-11;14!UBERON:0001555;4.13e-10;54!UBERON:0006562;9.06e-10;2!UBERON:0001829;9.06e-10;2!UBERON:0003127;1.51e-09;2!UBERON:0001007;3.83e-09;81!UBERON:0000160;6.33e-09;17!UBERON:0000161;1.38e-08;19!UBERON:0000166;1.38e-08;19!UBERON:0001155;2.25e-08;9!UBERON:0002465;1.33e-07;10!UBERON:0005409;4.21e-07;22!UBERON:0000059;5.23e-07;11!UBERON:0001043;8.86e-07;3!UBERON:0002106;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.66e-18,1;UBERON:0001153,2.66e-18,1;UBERON:0001045,2.66e-18,1;UBERON:0002372,3.16e-18,1;UBERON:0001961,3.16e-18,1;UBERON:0001744,3.16e-18,1;UBERON:0001735,3.16e-18,1;UBERON:0001736,3.75e-18,1;UBERON:0006298,3.75e-18,1;UBERON:0000029,7.37e-18,1;UBERON:0007023,9.64e-14,114;UBERON:0001044,3.64e-12,6;UBERON:0003293,3.64e-12,6;UBERON:0003294,3.64e-12,6;UBERON:0010047,3.64e-12,6;UBERON:0000167,3.64e-12,6;UBERON:0004921,1.38e-10,118;UBERON:0005409,1.64e-10,25;UBERON:0001829,9.46e-10,2;UBERON:0003127,2.02e-09,2;UBERON:0000160,6.00e-09,17;UBERON:0001007,1.75e-08,145;UBERON:0001555,1.75e-08,145;UBERON:0007026,1.75e-08,145;UBERON:0001155,2.05e-08,9;UBERON:0003408,1.16e-07,10;UBERON:0002465,1.24e-07,10;UBERON:0004119,1.28e-07,160;UBERON:0000925,1.28e-07,160;UBERON:0006595,1.28e-07,160;UBERON:0000166,1.73e-07,22;UBERON:0000059,4.85e-07,11;UBERON:0001043,8.62e-07,3;UBERON:0009143,8.62e-07,3 | |||
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|short_description=p@chr22:23227835..23227842,+ | |short_description=p@chr22:23227835..23227842,+ | ||
}} | }} |
Latest revision as of 19:26, 28 July 2015
Short description: | p@chr22:23227835..23227842, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:23227835..23227842, + |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.66e-18 | 1 |
caecum | 2.66e-18 | 1 |
midgut | 2.66e-18 | 1 |
tonsil | 3.16e-18 | 1 |
mucosa-associated lymphoid tissue | 3.16e-18 | 1 |
lymphoid tissue | 3.16e-18 | 1 |
tonsillar ring | 3.16e-18 | 1 |
submandibular gland | 3.75e-18 | 1 |
submandibular gland primordium | 3.75e-18 | 1 |
lymph node | 7.37e-18 | 1 |
adult organism | 9.64e-14 | 114 |
saliva-secreting gland | 3.64e-12 | 6 |
gland of oral region | 3.64e-12 | 6 |
gland of foregut | 3.64e-12 | 6 |
oral gland | 3.64e-12 | 6 |
oral cavity | 3.64e-12 | 6 |
subdivision of digestive tract | 1.38e-10 | 118 |
gastrointestinal system | 1.64e-10 | 25 |
major salivary gland | 9.46e-10 | 2 |
open tracheal system trachea | 2.02e-09 | 2 |
intestine | 6.00e-09 | 17 |
digestive system | 1.75e-08 | 145 |
digestive tract | 1.75e-08 | 145 |
primitive gut | 1.75e-08 | 145 |
colon | 2.05e-08 | 9 |
gland of gut | 1.16e-07 | 10 |
lymphoid system | 1.24e-07 | 10 |
endoderm-derived structure | 1.28e-07 | 160 |
endoderm | 1.28e-07 | 160 |
presumptive endoderm | 1.28e-07 | 160 |
oral opening | 1.73e-07 | 22 |
large intestine | 4.85e-07 | 11 |
esophagus | 8.62e-07 | 3 |
esophageal region | 8.62e-07 | 3 |