FFCP PHASE1:Hg19::chr22:37571089..37571097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3560 | |EntrezGene=3560 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6009 | |HGNC=6009 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYC1,B0QYC2,B0QYC0 | |UniProt=B0QYC1,B0QYC2,B0QYC0 | ||
|association_with_transcript=0bp_to_ENST00000429622,ENST00000445595,ENST00000453962,ENST00000461607_5end | |association_with_transcript=0bp_to_ENST00000429622,ENST00000445595,ENST00000453962,ENST00000461607_5end | ||
|cluster_id=chr22:37571089..37571097,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_3_at_IL2RB_5end | |description=CAGE_peak_3_at_IL2RB_5end | ||
|id=chr22:37571089..37571097,- | |id=chr22:37571089..37571097,- | ||
|ontology_enrichment_celltype=CL:0002541!6.14e-29!3;CL:0000039!4.65e-21!7;CL:0000586!4.65e-21!7;CL:0002537!2.19e-08!5 | |ontology_enrichment_celltype=CL:0002541!6.14e-29!3;CL:0000039!4.65e-21!7;CL:0000586!4.65e-21!7;CL:0002537!2.19e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.99e-60;3!CL:0000349;2.58e-26;19!CL:0002537;8.82e-17;5!CL:0000039;2.98e-12;7!CL:0000586;2.98e-12;7!CL:0000134;2.10e-07;55!CL:0000723;2.92e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.99e-60,3;CL:0000349,2.58e-26,19;CL:0002537,8.82e-17,5;CL:0000039,2.98e-12,7;CL:0000586,2.98e-12,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.82e-21;1 | |||
|ontology_enrichment_disease=DOID:3095!7.92e-07!22;DOID:2994!7.92e-07!22 | |ontology_enrichment_disease=DOID:3095!7.92e-07!22;DOID:2994!7.92e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!6.14e-29!3;UBERON:0000920!6.14e-29!3;UBERON:0005631!1.07e-23!14;UBERON:0000158!1.07e-23!14;UBERON:0003124!8.26e-22!7;UBERON:0000478!1.18e-13!24;UBERON:0000997!4.75e-10!1;UBERON:0005056!4.75e-10!1 | |ontology_enrichment_uberon=UBERON:0000476!6.14e-29!3;UBERON:0000920!6.14e-29!3;UBERON:0005631!1.07e-23!14;UBERON:0000158!1.07e-23!14;UBERON:0003124!8.26e-22!7;UBERON:0000478!1.18e-13!24;UBERON:0000997!4.75e-10!1;UBERON:0005056!4.75e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.99e-60;3!UBERON:0000920;1.99e-60;3!UBERON:0005631;1.13e-49;10!UBERON:0000158;1.13e-49;10!UBERON:0000478;9.22e-30;24!UBERON:0000305;2.82e-12;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.99e-60,3;UBERON:0005631,6.85e-51,14;UBERON:0000158,6.85e-51,14;UBERON:0003124,6.29e-46,7;UBERON:0000478,9.23e-30,24;UBERON:0000305,2.82e-12,7;UBERON:0004871,7.30e-11,8;UBERON:0004923,8.05e-11,66 | |||
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|short_description=p3@IL2RB | |short_description=p3@IL2RB | ||
}} | }} |
Latest revision as of 04:15, 20 September 2015
Short description: | p3@IL2RB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL2RB_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000429622, ENST00000445595, ENST00000453962, ENST00000461607_5end |
EntrezGene: | IL2RB |
HGNC: | 6009 |
UniProt: | B0QYC1B0QYC2B0QYC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.99e-60 | 3 |
extraembryonic cell | 2.58e-26 | 19 |
amnion mesenchymal stem cell | 8.82e-17 | 5 |
germ line cell | 2.98e-12 | 7 |
germ cell | 2.98e-12 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.99e-60 | 3 |
extraembryonic membrane | 6.85e-51 | 14 |
membranous layer | 6.85e-51 | 14 |
chorion | 6.29e-46 | 7 |
extraembryonic structure | 9.23e-30 | 24 |
amnion | 2.82e-12 | 7 |
somatic layer of lateral plate mesoderm | 7.30e-11 | 8 |
organ component layer | 8.05e-11 | 66 |