FFCP PHASE1:Hg19::chr2:153381914..153381934,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:153381914..153381934,+ | |||
|coexpression_cluster_id=C420 | |coexpression_cluster_id=C420 | ||
|description=CAGE_peak_at_chr2:153381914..153381934,+ | |description=CAGE_peak_at_chr2:153381914..153381934,+ | ||
|id=chr2:153381914..153381934,+ | |id=chr2:153381914..153381934,+ | ||
|ontology_enrichment_celltype=CL:0002573!8.75e-11!2;CL:0000708!9.36e-10!3 | |ontology_enrichment_celltype=CL:0002573!8.75e-11!2;CL:0000708!9.36e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0002573;1.71e-66;2!CL:0000243;9.17e-13;15!CL:0000125;9.17e-13;15!CL:0000095;1.55e-11;17!CL:0002319;1.98e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,1.71e-66,2;CL:0000243,9.17e-13,15;CL:0000125,9.17e-13,15;CL:0000030,9.17e-13,15;CL:0000339,9.17e-13,15;CL:0000095,1.55e-11,17;CL:0000123,1.55e-11,17;CL:0002319,1.98e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000339;9.17e-13;15 | |||
|ontology_enrichment_disease=DOID:3347!1.63e-08!1;DOID:0060085!2.50e-08!1;DOID:3165!2.50e-08!1;DOID:0060121!2.50e-08!1;DOID:2438!2.50e-08!1;DOID:4418!2.50e-08!1;DOID:3112!3.83e-08!1 | |ontology_enrichment_disease=DOID:3347!1.63e-08!1;DOID:0060085!2.50e-08!1;DOID:3165!2.50e-08!1;DOID:0060121!2.50e-08!1;DOID:2438!2.50e-08!1;DOID:4418!2.50e-08!1;DOID:3112!3.83e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001264!8.42e-12!10;UBERON:0003922!8.42e-12!10;UBERON:0003923!8.42e-12!10;UBERON:0003924!8.42e-12!10;UBERON:0003921!8.42e-12!10;UBERON:0001045!9.72e-11!11;UBERON:0003210!9.36e-10!3;UBERON:0002114!4.21e-09!12;UBERON:0002336!4.11e-08!1;UBERON:0001018!4.11e-08!1;UBERON:0002473!4.11e-08!1;UBERON:0005340!4.11e-08!1;UBERON:0002316!4.11e-08!1;UBERON:0003544!4.11e-08!1;UBERON:0001020!4.11e-08!1;UBERON:0005970!4.11e-08!1;UBERON:0002437!4.11e-08!1;UBERON:0001282!5.07e-08!1;UBERON:0009842!5.07e-08!1;UBERON:0003704!5.07e-08!1;UBERON:0001171!5.07e-08!1;UBERON:0001172!5.07e-08!1;UBERON:0002108!6.72e-08!14 | |ontology_enrichment_uberon=UBERON:0001264!8.42e-12!10;UBERON:0003922!8.42e-12!10;UBERON:0003923!8.42e-12!10;UBERON:0003924!8.42e-12!10;UBERON:0003921!8.42e-12!10;UBERON:0001045!9.72e-11!11;UBERON:0003210!9.36e-10!3;UBERON:0002114!4.21e-09!12;UBERON:0002336!4.11e-08!1;UBERON:0001018!4.11e-08!1;UBERON:0002473!4.11e-08!1;UBERON:0005340!4.11e-08!1;UBERON:0002316!4.11e-08!1;UBERON:0003544!4.11e-08!1;UBERON:0001020!4.11e-08!1;UBERON:0005970!4.11e-08!1;UBERON:0002437!4.11e-08!1;UBERON:0001282!5.07e-08!1;UBERON:0009842!5.07e-08!1;UBERON:0003704!5.07e-08!1;UBERON:0001171!5.07e-08!1;UBERON:0001172!5.07e-08!1;UBERON:0002108!6.72e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000010;4.59e-23;8!UBERON:0001264;1.04e-20;10!UBERON:0002075;5.09e-12;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.59e-23,8;UBERON:0001264,1.04e-20,10;UBERON:0002075,5.09e-12,18 | |||
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|short_description=p@chr2:153381914..153381934,+ | |short_description=p@chr2:153381914..153381934,+ | ||
}} | }} |
Latest revision as of 01:28, 29 July 2015
Short description: | p@chr2:153381914..153381934, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:153381914..153381934, + |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 1.71e-66 | 2 |
glial cell (sensu Vertebrata) | 9.17e-13 | 15 |
glial cell | 9.17e-13 | 15 |
glioblast | 9.17e-13 | 15 |
glioblast (sensu Vertebrata) | 9.17e-13 | 15 |
neuron associated cell | 1.55e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.55e-11 | 17 |
neural cell | 1.98e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 4.59e-23 | 8 |
pancreas | 1.04e-20 | 10 |
viscus | 5.09e-12 | 18 |