FFCP PHASE1:Hg19::chr2:208104240..208104269,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-104bp_to_ENST00000440326_5end | |association_with_transcript=-104bp_to_ENST00000440326_5end | ||
|cluster_id=chr2:208104240..208104269,+ | |||
|coexpression_cluster_id=C1890 | |coexpression_cluster_id=C1890 | ||
|description=CAGE_peak_2_at_ENST00000440326_5end | |description=CAGE_peak_2_at_ENST00000440326_5end | ||
|id=chr2:208104240..208104269,+ | |id=chr2:208104240..208104269,+ | ||
|ontology_enrichment_celltype=CL:0000548!8.36e-14!679;CL:0000004!8.36e-14!679;CL:0000255!8.36e-14!679;CL:0000144!1.21e-13!625;CL:0000012!1.82e-13!682;CL:0000220!9.53e-13!246;CL:0002321!2.03e-12!248;CL:0002371!2.19e-11!591;CL:0002368!3.17e-10!13;CL:0002076!1.55e-09!43;CL:0002159!2.34e-09!13;CL:0000003!2.90e-09!722;CL:0000055!1.50e-08!180;CL:0000188!1.46e-07!9;CL:0002077!5.94e-07!33;CL:0000680!6.13e-07!57;CL:0000056!6.13e-07!57;CL:0000355!6.13e-07!57 | |ontology_enrichment_celltype=CL:0000548!8.36e-14!679;CL:0000004!8.36e-14!679;CL:0000255!8.36e-14!679;CL:0000144!1.21e-13!625;CL:0000012!1.82e-13!682;CL:0000220!9.53e-13!246;CL:0002321!2.03e-12!248;CL:0002371!2.19e-11!591;CL:0002368!3.17e-10!13;CL:0002076!1.55e-09!43;CL:0002159!2.34e-09!13;CL:0000003!2.90e-09!722;CL:0000055!1.50e-08!180;CL:0000188!1.46e-07!9;CL:0002077!5.94e-07!33;CL:0000680!6.13e-07!57;CL:0000056!6.13e-07!57;CL:0000355!6.13e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002368;6.81e-22;13!CL:0002159;9.25e-16;14!CL:0002076;1.17e-13;42!CL:0002202;3.48e-13;9!CL:0002632;3.48e-13;9!CL:0000244;3.30e-11;4!CL:0000731;3.30e-11;4!CL:0000307;1.31e-08;3!CL:0002328;2.83e-08;3!CL:0002166;4.57e-08;3!CL:0002077;5.69e-08;34!CL:0002621;5.73e-08;3!CL:0000680;1.71e-07;7!CL:0000240;2.88e-07;6!CL:0000311;2.88e-07;6!CL:0000079;2.88e-07;6!CL:0000237;2.88e-07;6!CL:0000362;6.40e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,5.83e-22,13;CL:0002076,8.04e-17,42;CL:0002159,9.22e-16,14;CL:0000066,3.77e-14,253;CL:0002202,3.34e-13,9;CL:0002632,3.34e-13,9;CL:0000223,4.44e-12,58;CL:0000244,3.31e-11,4;CL:0000731,3.31e-11,4;CL:0002321,3.58e-09,250;CL:0002077,4.99e-09,34;CL:0000068,1.32e-08,3;CL:0000069,1.32e-08,3;CL:0000307,1.32e-08,3;CL:0000377,1.32e-08,3;CL:0002328,2.70e-08,3;CL:0002166,4.26e-08,3;CL:0002621,4.69e-08,3;CL:0000076,9.85e-08,63;CL:0000240,2.86e-07,6;CL:0000311,2.86e-07,6;CL:0000079,2.86e-07,6;CL:0000237,2.86e-07,6;CL:0000036,2.86e-07,6;CL:0000357,2.86e-07,6;CL:0000114,2.86e-07,6;CL:0000362,6.96e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.31e-08;3!CL:0000223;1.29e-07;58!CL:0000357;2.88e-07;6!CL:0000114;2.88e-07;6 | |||
|ontology_enrichment_disease=DOID:2394!7.21e-10!14 | |ontology_enrichment_disease=DOID:2394!7.21e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.99e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.16e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!4.64e-09!82;UBERON:0000914!1.45e-07!83;UBERON:0002329!1.45e-07!83;UBERON:0003077!1.45e-07!83;UBERON:0003059!1.45e-07!83;UBERON:0007282!1.45e-07!83;UBERON:0009618!1.45e-07!83;UBERON:0007285!1.45e-07!83;UBERON:0000365!7.61e-07!5 | |ontology_enrichment_uberon=UBERON:0000486!4.64e-09!82;UBERON:0000914!1.45e-07!83;UBERON:0002329!1.45e-07!83;UBERON:0003077!1.45e-07!83;UBERON:0003059!1.45e-07!83;UBERON:0007282!1.45e-07!83;UBERON:0009618!1.45e-07!83;UBERON:0007285!1.45e-07!83;UBERON:0000365!7.61e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.32e-13;5!UBERON:0000486;2.01e-12;12!UBERON:0005910;6.47e-11;6!UBERON:0007196;2.22e-09;15!UBERON:0001558;2.22e-09;15!UBERON:0004815;2.83e-08;3!UBERON:0002031;2.83e-08;3!UBERON:0005911;3.61e-08;36!UBERON:0001949;5.73e-08;3!UBERON:0010371;5.70e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.13e-13,5;UBERON:0005910,6.17e-11,6;UBERON:0007196,2.22e-09,15;UBERON:0001558,2.22e-09,15;UBERON:0004815,2.70e-08,3;UBERON:0002031,2.70e-08,3;UBERON:0001949,4.69e-08,3 | |||
|phase1_expression=1.63510541343501,0.856402095563933,0.986680828671798,0,0.446961094427288,0.872338524100369,0,3.79031924056099,0,4.66894479352867,3.48900583986214,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,2.75826367343678,9.0361775633475,12.5716363456708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0,0,0,0.567208902984407,0,0.351339142772504,0,2.91436230634034,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36094052142534,0,0.506522046658319,4.50191214764944,0.286836620748814,0,0,0,0,0,0.404132016209064,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.485618833104395,0.140450806702248,0,0,0.103325781175765,0,0,1.82032272387605,1.43723628363248,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,1.02088964844019,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0.184099797284599,0,0.355009592516614,0.201504196455281,0.169560592310488,3.67195621010264,3.81844568827169,7.1701148847251,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0.8231480226628,0,0,0,0,0,0,3.43135620597051,9.54827483055042,11.240175325762,11.4603028549259,6.11083738046295,0,0,1.44331342025273,0.115930404975077,0.939269553886573,0,0,0,0,0,0,0,0,4.68669169933885,4.19955320497149,4.96212840348353,17.4639119270554,8.71901815541886,10.7347150166259,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0,1.54010400223995,0.517086863031111,0,2.535908257668,0.26593811658487,0,0.257207374262142,1.41849132023278,0.532844358032199,0.142977993658148,0.542621605391443,0.823240336780769,5.21177894869976,0,0.791951872933429,5.72734816413214,2.61460037580088,1.09970290300263,0,0,0,0.479249710983165,0,1.42636905040718,2.60606352001643,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0.315404830067869,0.585707074963566,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.640695746278505,0,0.160853921143607,1.48418066444991,0.308419387605311,0.355123450626254,0.0821271560138091,0.519254429183621,0.348631135379878,0,6.81721999031168,7.73480307061529,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,4.01985876597321,3.25030123018261,3.21367859688319,0.290012154876366,0.770243085573222,0.921022048356777,1.24052915236078,2.57808587683857,0.725083469571143,1.87498580315422,0.267096106940212,11.2393742445465,4.80475168412765,24.6292535114547,4.95673126192195,0.929691098594572,0.94443704049192,0,1.84820148105653,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0.38126038784765,0.255897791311334,0,0.95460974377781,0,0.719489830333259,0.823611089208164,0.471249609382746,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,14.0484284579248,9.38423185750102,5.44454924306613,0,21.9557740062327,21.9012918367913,7.09488245658681,11.7158934105549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0,0,1.24415835064723,0.0898683511473268,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,3.22119064347489,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,3.42604811616877,0.397429223405979,0,0,0,0,0,0,0,0,0,0.372757606696298,0,0.135904206073614,0,0,0.577901179803038,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,0,0.575745591958336,0,0,0,0,2.5926644736038,0.326587360109409,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,1.17632909849086,0,0,0.74627401443437,1.40227985908335,0.554805861502613,0,1.25783950876288,0.889811221596536,0.228840068396924,0.302461847526478,0.310874401165561,0,1.11507737014592,0.899606224327209,0.776314784381297,0,3.19010057469594,1.5652351854352,1.20206087197775,7.9969094555447,0.813741466409323,0.363697318405119,1.61115835563733,1.85613503951397,2.78667122089031,1.60011105865261,0.343395705182793,0,0,0,0,0.260994291965212,0.226705925512272,1.85217979459067,0.734210113519403,0.537266523244462,0,0,3.35709377297174,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,2.65771064666944,19.9064723210551,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,5.59441995455846,0,0.183428598521679,0.808679663052368,0,0.690359926060101,0,0,0.20170506870352,0,0,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|phase1_expression=1.63510541343501,0.856402095563933,0.986680828671798,0,0.446961094427288,0.872338524100369,0,3.79031924056099,0,4.66894479352867,3.48900583986214,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,2.75826367343678,9.0361775633475,12.5716363456708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0,0,0,0.567208902984407,0,0.351339142772504,0,2.91436230634034,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36094052142534,0,0.506522046658319,4.50191214764944,0.286836620748814,0,0,0,0,0,0.404132016209064,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0.485618833104395,0.140450806702248,0,0,0.103325781175765,0,0,1.82032272387605,1.43723628363248,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,1.02088964844019,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0.184099797284599,0,0.355009592516614,0.201504196455281,0.169560592310488,3.67195621010264,3.81844568827169,7.1701148847251,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0.8231480226628,0,0,0,0,0,0,3.43135620597051,9.54827483055042,11.240175325762,11.4603028549259,6.11083738046295,0,0,1.44331342025273,0.115930404975077,0.939269553886573,0,0,0,0,0,0,0,0,4.68669169933885,4.19955320497149,4.96212840348353,17.4639119270554,8.71901815541886,10.7347150166259,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0,1.54010400223995,0.517086863031111,0,2.535908257668,0.26593811658487,0,0.257207374262142,1.41849132023278,0.532844358032199,0.142977993658148,0.542621605391443,0.823240336780769,5.21177894869976,0,0.791951872933429,5.72734816413214,2.61460037580088,1.09970290300263,0,0,0,0.479249710983165,0,1.42636905040718,2.60606352001643,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0.315404830067869,0.585707074963566,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.640695746278505,0,0.160853921143607,1.48418066444991,0.308419387605311,0.355123450626254,0.0821271560138091,0.519254429183621,0.348631135379878,0,6.81721999031168,7.73480307061529,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,4.01985876597321,3.25030123018261,3.21367859688319,0.290012154876366,0.770243085573222,0.921022048356777,1.24052915236078,2.57808587683857,0.725083469571143,1.87498580315422,0.267096106940212,11.2393742445465,4.80475168412765,24.6292535114547,4.95673126192195,0.929691098594572,0.94443704049192,0,1.84820148105653,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0.38126038784765,0.255897791311334,0,0.95460974377781,0,0.719489830333259,0.823611089208164,0.471249609382746,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,14.0484284579248,9.38423185750102,5.44454924306613,0,21.9557740062327,21.9012918367913,7.09488245658681,11.7158934105549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0,0,1.24415835064723,0.0898683511473268,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,3.22119064347489,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,3.42604811616877,0.397429223405979,0,0,0,0,0,0,0,0,0,0.372757606696298,0,0.135904206073614,0,0,0.577901179803038,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,0,0.575745591958336,0,0,0,0,2.5926644736038,0.326587360109409,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,1.17632909849086,0,0,0.74627401443437,1.40227985908335,0.554805861502613,0,1.25783950876288,0.889811221596536,0.228840068396924,0.302461847526478,0.310874401165561,0,1.11507737014592,0.899606224327209,0.776314784381297,0,3.19010057469594,1.5652351854352,1.20206087197775,7.9969094555447,0.813741466409323,0.363697318405119,1.61115835563733,1.85613503951397,2.78667122089031,1.60011105865261,0.343395705182793,0,0,0,0,0.260994291965212,0.226705925512272,1.85217979459067,0.734210113519403,0.537266523244462,0,0,3.35709377297174,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,2.65771064666944,19.9064723210551,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,5.59441995455846,0,0.183428598521679,0.808679663052368,0,0.690359926060101,0,0,0.20170506870352,0,0,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| ||
|short_description=p2@ENST00000440326 | |short_description=p2@ENST00000440326 | ||
}} | }} |
Latest revision as of 05:27, 29 July 2015
Short description: | p2@ENST00000440326 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000440326_5end |
Coexpression cluster: | C1890_Small_nasal_Mammary_Urothelial_Keratinocyte_squamous_oral |
Association with transcript: | -104bp_to_ENST00000440326_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 5.83e-22 | 13 |
endo-epithelial cell | 8.04e-17 | 42 |
general ecto-epithelial cell | 9.22e-16 | 14 |
epithelial cell | 3.77e-14 | 253 |
epithelial cell of tracheobronchial tree | 3.34e-13 | 9 |
epithelial cell of lower respiratory tract | 3.34e-13 | 9 |
endodermal cell | 4.44e-12 | 58 |
transitional epithelial cell | 3.31e-11 | 4 |
urothelial cell | 3.31e-11 | 4 |
embryonic cell | 3.58e-09 | 250 |
ecto-epithelial cell | 4.99e-09 | 34 |
duct epithelial cell | 1.32e-08 | 3 |
branched duct epithelial cell | 1.32e-08 | 3 |
tracheal epithelial cell | 1.32e-08 | 3 |
tracheoblast | 1.32e-08 | 3 |
bronchial epithelial cell | 2.70e-08 | 3 |
epithelial cell of Malassez | 4.26e-08 | 3 |
gingival epithelial cell | 4.69e-08 | 3 |
squamous epithelial cell | 9.85e-08 | 63 |
stratified squamous epithelial cell | 2.86e-07 | 6 |
keratin accumulating cell | 2.86e-07 | 6 |
stratified epithelial cell | 2.86e-07 | 6 |
keratinizing barrier epithelial cell | 2.86e-07 | 6 |
epithelial fate stem cell | 2.86e-07 | 6 |
stratified epithelial stem cell | 2.86e-07 | 6 |
surface ectodermal cell | 2.86e-07 | 6 |
epidermal cell | 6.96e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.13e-13 | 5 |
transitional epithelium | 6.17e-11 | 6 |
tracheobronchial tree | 2.22e-09 | 15 |
lower respiratory tract | 2.22e-09 | 15 |
lower respiratory tract epithelium | 2.70e-08 | 3 |
epithelium of bronchus | 2.70e-08 | 3 |
gingival epithelium | 4.69e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.16e-09 | 14 |