FFCP PHASE1:Hg19::chr2:211409781..211409812,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:211409781..211409812,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_at_chr2:211409781..211409812,+ | |description=CAGE_peak_at_chr2:211409781..211409812,+ | ||
|id=chr2:211409781..211409812,+ | |id=chr2:211409781..211409812,+ | ||
|ontology_enrichment_celltype=CL:0002568!3.61e-10!1 | |ontology_enrichment_celltype=CL:0002568!3.61e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0002231;1.46e-08;3!CL:0002563;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.40e-08,3;CL:0002563,8.61e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!2.08e-10!1;DOID:326!2.08e-10!1;DOID:3978!2.08e-10!1;DOID:3394!2.08e-10!1;DOID:5844!2.08e-10!1 | |ontology_enrichment_disease=DOID:178!2.08e-10!1;DOID:326!2.08e-10!1;DOID:3978!2.08e-10!1;DOID:3394!2.08e-10!1;DOID:5844!2.08e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.48e-24!35;UBERON:0000160!2.92e-20!27;UBERON:0000059!1.23e-13!11;UBERON:0001154!2.50e-10!1;UBERON:0001153!2.50e-10!1;UBERON:0001155!8.24e-10!9;UBERON:0004921!3.25e-08!129;UBERON:0004185!3.25e-08!129;UBERON:0004907!3.40e-08!5 | |ontology_enrichment_uberon=UBERON:0005409!4.48e-24!35;UBERON:0000160!2.92e-20!27;UBERON:0000059!1.23e-13!11;UBERON:0001154!2.50e-10!1;UBERON:0001153!2.50e-10!1;UBERON:0001155!8.24e-10!9;UBERON:0004921!3.25e-08!129;UBERON:0004185!3.25e-08!129;UBERON:0004907!3.40e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.12e-44;17!UBERON:0002108;1.49e-40;4!UBERON:0005409;1.66e-34;22!UBERON:0004921;3.92e-21;33!UBERON:0001155;8.57e-11;9!UBERON:0001555;3.75e-09;54!UBERON:0000059;5.31e-09;11!UBERON:0002114;1.04e-08;2!UBERON:0001242;8.85e-07;4!UBERON:0001262;8.85e-07;4!UBERON:0004786;8.85e-07;4!UBERON:0004808;8.85e-07;4!UBERON:0001277;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.12e-44,17;UBERON:0002108,1.49e-40,4;UBERON:0005409,1.49e-30,25;UBERON:0001155,8.79e-11,9;UBERON:0000059,5.41e-09,11;UBERON:0004921,5.76e-09,118;UBERON:0002114,1.04e-08,2;UBERON:0001007,2.90e-07,145;UBERON:0001555,2.90e-07,145;UBERON:0007026,2.90e-07,145;UBERON:0001242,8.61e-07,4;UBERON:0001262,8.61e-07,4;UBERON:0004786,8.61e-07,4;UBERON:0004808,8.61e-07,4;UBERON:0001277,8.61e-07,4 | |||
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|short_description=p@chr2:211409781..211409812,+ | |short_description=p@chr2:211409781..211409812,+ | ||
}} | }} |
Latest revision as of 05:44, 29 July 2015
Short description: | p@chr2:211409781..211409812, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:211409781..211409812, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.40e-08 | 3 |
intestinal epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.12e-44 | 17 |
small intestine | 1.49e-40 | 4 |
gastrointestinal system | 1.49e-30 | 25 |
colon | 8.79e-11 | 9 |
large intestine | 5.41e-09 | 11 |
subdivision of digestive tract | 5.76e-09 | 118 |
duodenum | 1.04e-08 | 2 |
digestive system | 2.90e-07 | 145 |
digestive tract | 2.90e-07 | 145 |
primitive gut | 2.90e-07 | 145 |
intestinal mucosa | 8.61e-07 | 4 |
wall of intestine | 8.61e-07 | 4 |
gastrointestinal system mucosa | 8.61e-07 | 4 |
gastrointestinal system epithelium | 8.61e-07 | 4 |
intestinal epithelium | 8.61e-07 | 4 |