FFCP PHASE1:Hg19::chr3:112033054..112033064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112033054..112033064,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_at_chr3:112033054..112033064,- | |description=CAGE_peak_at_chr3:112033054..112033064,- | ||
|id=chr3:112033054..112033064,- | |id=chr3:112033054..112033064,- | ||
|ontology_enrichment_celltype=CL:0000540!2.06e-30!6;CL:0000031!2.06e-30!6;CL:0000404!2.06e-30!6;CL:0000047!5.13e-23!8;CL:0000080!3.97e-14!6;CL:0002319!2.83e-07!25 | |ontology_enrichment_celltype=CL:0000540!2.06e-30!6;CL:0000031!2.06e-30!6;CL:0000404!2.06e-30!6;CL:0000047!5.13e-23!8;CL:0000080!3.97e-14!6;CL:0002319!2.83e-07!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-08;14!DOID:3119;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-08,14;DOID:3119,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000945!6.61e-11!8;UBERON:0010039!6.61e-11!8;UBERON:0002331!7.36e-09!10;UBERON:0000358!7.36e-09!10;UBERON:0000307!7.36e-09!10;UBERON:0000091!7.36e-09!10;UBERON:0000087!7.36e-09!10;UBERON:0007806!7.36e-09!10;UBERON:0008780!7.36e-09!10;UBERON:0005728!7.36e-09!10;UBERON:0002106!7.76e-08!3;UBERON:0004854!7.76e-08!3;UBERON:0009034!7.76e-08!3;UBERON:0002095!7.76e-08!3;UBERON:0004782!7.76e-08!3;UBERON:0003281!7.76e-08!3;UBERON:0009664!7.76e-08!3;UBERON:0002296!7.76e-08!3;UBERON:0005602!7.76e-08!3;UBERON:0001179!7.76e-08!3;UBERON:0006293!7.76e-08!3 | |ontology_enrichment_uberon=UBERON:0000945!6.61e-11!8;UBERON:0010039!6.61e-11!8;UBERON:0002331!7.36e-09!10;UBERON:0000358!7.36e-09!10;UBERON:0000307!7.36e-09!10;UBERON:0000091!7.36e-09!10;UBERON:0000087!7.36e-09!10;UBERON:0007806!7.36e-09!10;UBERON:0008780!7.36e-09!10;UBERON:0005728!7.36e-09!10;UBERON:0002106!7.76e-08!3;UBERON:0004854!7.76e-08!3;UBERON:0009034!7.76e-08!3;UBERON:0002095!7.76e-08!3;UBERON:0004782!7.76e-08!3;UBERON:0003281!7.76e-08!3;UBERON:0009664!7.76e-08!3;UBERON:0002296!7.76e-08!3;UBERON:0005602!7.76e-08!3;UBERON:0001179!7.76e-08!3;UBERON:0006293!7.76e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;5.15e-21;5!UBERON:0010039;5.15e-21;5!UBERON:0001041;2.00e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.07e-13,8;UBERON:0010039,1.07e-13,8 | |||
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|short_description=p@chr3:112033054..112033064,- | |short_description=p@chr3:112033054..112033064,- | ||
}} | }} |
Latest revision as of 14:14, 29 July 2015
Short description: | p@chr3:112033054..112033064, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112033054..112033064, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stomach | 1.07e-13 | 8 |
food storage organ | 1.07e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-08 | 14 |
gastrointestinal system cancer | 2.00e-08 | 14 |