FFCP PHASE1:Hg19::chr19:291133..291152,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:291133..291152,-
|short_description=p4@PPAP2C
|description=CAGE_peak_4_at_PPAP2C_5end
|association_with_transcript=16bp_to_ENST00000327790,NM_177543,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8612 | |EntrezGene=8612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9230 | |HGNC=9230 | ||
|TSSclassifier=strong | |||
|UniProt=O43688 | |UniProt=O43688 | ||
|association_with_transcript=16bp_to_ENST00000327790,NM_177543,uc002loh.2_5end | |||
|cluster_id=chr19:291133..291152,- | |||
|description=CAGE_peak_4_at_PPAP2C_5end | |||
|id=chr19:291133..291152,- | |||
|ontology_enrichment_celltype=CL:0000066!7.46e-23!254;CL:0000076!5.52e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.17e-09;3!CL:0000243;4.61e-08;15!CL:0000125;4.61e-08;15!CL:0000095;4.20e-07;17!CL:0000082;4.20e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.43e-13,253;CL:0002178,2.96e-09,3;CL:0000243,9.53e-08,15;CL:0000125,9.53e-08,15;CL:0000030,9.53e-08,15;CL:0000339,9.53e-08,15;CL:0000082,6.01e-07,19;CL:0000095,7.94e-07,17;CL:0000123,7.94e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000339;4.61e-08;15 | |||
|ontology_enrichment_disease=DOID:305!1.55e-19!106;DOID:0050687!7.38e-16!143;DOID:299!5.55e-12!25;DOID:14566!1.71e-10!239;DOID:162!6.89e-10!235;DOID:120!1.88e-08!27;DOID:193!2.16e-08!29;DOID:0050615!2.24e-08!16;DOID:1324!9.03e-08!15 | |||
|ontology_enrichment_disease_v019=DOID:299;2.31e-10;25!DOID:1324;2.80e-09;15!DOID:0050615;1.24e-08;16!DOID:5409;2.43e-07;4!DOID:4074;5.51e-07;2!DOID:4905;5.51e-07;2!DOID:3493;5.51e-07;2!DOID:3498;5.51e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.18e-13,143;DOID:305,1.65e-12,106;DOID:14566,4.04e-11,239;DOID:299,4.50e-10,25;DOID:162,5.26e-10,235;DOID:1324,4.50e-09,15;DOID:0050615,1.93e-08,16;DOID:3493,2.13e-07,2;DOID:5409,4.60e-07,4;DOID:4074,4.94e-07,2;DOID:4905,4.94e-07,2;DOID:3498,4.94e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000464!1.35e-08!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;4.20e-07;19!UBERON:0000115;4.20e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001781,7.83e-08,4;UBERON:0004802,6.01e-07,19;UBERON:0000115,6.01e-07,19 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.495065411840187,1.65698687863958,0,0,0,0,0,1.22400414746552,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0,0.208994966536811,0.258416759169329,0.71153252537342,0.33472061276467,1.61131726843659,1.52054421143703,0.732186172644509,0.367663080345869,0.81014194788176,0,0,0.337834441449967,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.505008341862199,0,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.966304265816484,0,0,0.609868530647977,1.59035721985782,1.04574548582567,0.829288440122964,1.26160425437814,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0,0,0.144366447761074,0,1.71228737011138,1.58040879591855,0.858486162094873,0,0,0,1.87467667973554,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0.1466765716419,0.517086863031111,0,0,1.32969058292435,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.602878754119172,2.61460037580088,0.599837947092342,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0,0,0,2.27407504055985,0,0,0,0.0868836144680828,0.783204629850962,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0.116210378459959,0.120859449591622,0.802025881213139,0,0,0,0,0.451199612907412,0,1.56869953835371,0,0.211103257785751,0,0.340187410553031,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.895499018888713,0,0,0.256450125116389,1.96808787419823,1.95227036798582,0.206082023295445,0,0,0,0,0,0.386682873168488,0,0,0,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0.55597265731176,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0,0,0,0,0,0.699869440489966,0.288666338176536,0,0,0.0941438007767792,1.29151611801369,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0.593929361665277,0,0,0.140669416410513,0.667852230137435,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0.0927680981618513,0,1.04171104434093,0,0.724999575434793,1.4793148277115,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0.10893846351899,1.53366118706464,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.652931232636591,0.424059214301822,0,0,0.442287822516696,0,0,0,0,0.337005664903385,0,0.702793337176017,0,1.17398771359254,1.69946265673865,0.394584402849391,1.20990716048664,0,0,0.300646838828985,0,0,1.98595173525299,0.941798755221676,0,1.13843818411917,2.77349346026277,0.347119476670262,0,0.34823682632161,0,0,0.387025325156341,0.438535902517113,0.246346371159628,0.0969890164884194,0.794305140223502,0.451961481561065,0.137041924646751,0.596143835108969,0,0,0.0801588202515337,0.85381197895741,1.19885765749278,1.00863292007874,0.572682980829578,0,0.288109595976299,0.49701014226173,1.17847017308398,2.03856309110421,2.30126261887133,1.12198039399954,0.288950589901519,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0,0.739202355635845,0.179287339332845,0.767660789277781,0,0,0.5085370753095,0,0,0.326587360109409,0,0,0,0.566560457600628,0.146552233678082,0,0.646414781807753,0.13223260174269,2.05304205461195,2.11444506695002,0.106787412567695,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.785270481251171,0,0.122026264901963,0,0,0,0.18628920882415,0,1.37478448758317,0.454947352624943,0,0.235265819698172,0,0.869526171664951,0.149254802886874,0.233713309847224,0,0,0,0,0.457680136793847,0.151230923763239,0,0,0.318593534327405,0.449803112163605,0,0,0.53168342911599,0.521745061811734,0.300515217994437,0.380805212168795,0.406870733204662,0.727394636810238,0.644463342254931,0,0.796191777397232,0,0.343395705182793,0,0,0.192619830407303,0.643324774124777,1.82696004375648,0,0.231522474323834,0,1.25362188757041,0,0.219284049578707,0,1.15748422962549,2.36519416914302,1.02496607435179,0.34543034173119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| ||
|short_description=p4@PPAP2C | |||
}} | }} |
Latest revision as of 03:12, 17 September 2015
Short description: | p4@PPAP2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PPAP2C_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000327790, NM_177543, uc002loh.2_5end |
EntrezGene: | PPAP2C |
HGNC: | 9230 |
UniProt: | O43688 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.43e-13 | 253 |
epithelial cell of stomach | 2.96e-09 | 3 |
glial cell (sensu Vertebrata) | 9.53e-08 | 15 |
glial cell | 9.53e-08 | 15 |
glioblast | 9.53e-08 | 15 |
glioblast (sensu Vertebrata) | 9.53e-08 | 15 |
epithelial cell of lung | 6.01e-07 | 19 |
neuron associated cell | 7.94e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 7.94e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
layer of retina | 7.83e-08 | 4 |
respiratory tract epithelium | 6.01e-07 | 19 |
lung epithelium | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.18e-13 | 143 |
carcinoma | 1.65e-12 | 106 |
disease of cellular proliferation | 4.04e-11 | 239 |
adenocarcinoma | 4.50e-10 | 25 |
cancer | 5.26e-10 | 235 |
lung cancer | 4.50e-09 | 15 |
respiratory system cancer | 1.93e-08 | 16 |
signet ring cell adenocarcinoma | 2.13e-07 | 2 |
lung small cell carcinoma | 4.60e-07 | 4 |
pancreas adenocarcinoma | 4.94e-07 | 2 |
pancreatic carcinoma | 4.94e-07 | 2 |
pancreatic ductal adenocarcinoma | 4.94e-07 | 2 |