FFCP PHASE1:Hg19::chr3:54673186..54673191,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:54673186..54673191,- | |||
|coexpression_cluster_id=C425 | |coexpression_cluster_id=C425 | ||
|description=CAGE_peak_at_chr3:54673186..54673191,- | |description=CAGE_peak_at_chr3:54673186..54673191,- | ||
|id=chr3:54673186..54673191,- | |id=chr3:54673186..54673191,- | ||
|ontology_enrichment_celltype=CL:0002322!8.15e-66!5;CL:0000047!4.26e-27!8;CL:0000540!5.95e-21!6;CL:0000031!5.95e-21!6;CL:0000404!5.95e-21!6;CL:0000039!2.06e-17!7;CL:0000586!2.06e-17!7;CL:0000148!1.33e-12!10;CL:0000541!1.33e-12!10;CL:0000133!3.30e-10!59;CL:0000147!3.64e-09!14;CL:0000221!1.96e-08!71;CL:0002319!3.13e-08!25;CL:0002535!9.19e-08!2 | |ontology_enrichment_celltype=CL:0002322!8.15e-66!5;CL:0000047!4.26e-27!8;CL:0000540!5.95e-21!6;CL:0000031!5.95e-21!6;CL:0000404!5.95e-21!6;CL:0000039!2.06e-17!7;CL:0000586!2.06e-17!7;CL:0000148!1.33e-12!10;CL:0000541!1.33e-12!10;CL:0000133!3.30e-10!59;CL:0000147!3.64e-09!14;CL:0000221!1.96e-08!71;CL:0002319!3.13e-08!25;CL:0002535!9.19e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000540;6.35e-50;6!CL:0000404;6.35e-50;6!CL:0002319;8.62e-12;25!CL:0002322;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.35e-50,6;CL:0000031,6.35e-50,6;CL:0000404,6.35e-50,6;CL:0000047,1.04e-37,8;CL:0002319,8.62e-12,25;CL:0000133,3.07e-09,59;CL:0002322,6.55e-08,5;CL:0000221,1.05e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;6.35e-50;6 | |||
|ontology_enrichment_disease=DOID:3095!7.56e-10!22;DOID:2994!7.56e-10!22 | |ontology_enrichment_disease=DOID:3095!7.56e-10!22;DOID:2994!7.56e-10!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!2.55e-15!8;UBERON:0003135!2.61e-11!11;UBERON:0006955!9.19e-08!2;UBERON:0004801!9.19e-08!2 | |ontology_enrichment_uberon=UBERON:0000473!2.55e-15!8;UBERON:0003135!2.61e-11!11;UBERON:0006955!9.19e-08!2;UBERON:0004801!9.19e-08!2 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr3:54673186..54673191,- | |short_description=p@chr3:54673186..54673191,- | ||
}} | }} |
Latest revision as of 22:41, 29 July 2015
Short description: | p@chr3:54673186..54673191, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:54673186..54673191, - |
Coexpression cluster: | C425_iPS_HES3GFP_H9_teratocarcinoma_testicular_hepatocellular_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.35e-50 | 6 |
neuroblast | 6.35e-50 | 6 |
electrically signaling cell | 6.35e-50 | 6 |
neuronal stem cell | 1.04e-37 | 8 |
neural cell | 8.62e-12 | 25 |
neurectodermal cell | 3.07e-09 | 59 |
embryonic stem cell | 6.55e-08 | 5 |
ectodermal cell | 1.05e-07 | 72 |