FFCP PHASE1:Hg19::chr3:6759235..6759249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:6759235..6759249,+ | |||
|coexpression_cluster_id=C156 | |coexpression_cluster_id=C156 | ||
|description=CAGE_peak_at_chr3:6759235..6759249,+ | |description=CAGE_peak_at_chr3:6759235..6759249,+ | ||
|id=chr3:6759235..6759249,+ | |id=chr3:6759235..6759249,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.76e-22!24;CL:0000826!1.76e-22!24;CL:0000542!6.46e-17!53;CL:0000051!6.46e-17!53;CL:0000838!1.96e-14!52;CL:0000784!2.47e-10!3;CL:0002166!3.27e-10!3;CL:0000946!9.79e-09!1;CL:0000786!9.79e-09!1;CL:0000980!9.79e-09!1;CL:0000342!3.83e-08!1;CL:0002565!3.83e-08!1;CL:0000738!4.34e-07!140 | |ontology_enrichment_celltype=CL:0000945!1.76e-22!24;CL:0000826!1.76e-22!24;CL:0000542!6.46e-17!53;CL:0000051!6.46e-17!53;CL:0000838!1.96e-14!52;CL:0000784!2.47e-10!3;CL:0002166!3.27e-10!3;CL:0000946!9.79e-09!1;CL:0000786!9.79e-09!1;CL:0000980!9.79e-09!1;CL:0000342!3.83e-08!1;CL:0002565!3.83e-08!1;CL:0000738!4.34e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.29e-34;24!CL:0000946;1.84e-34;1!CL:0000786;1.84e-34;1!CL:0000542;1.91e-13;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.20e-34,24;CL:0000826,1.20e-34,24;CL:0000946,1.84e-34,1;CL:0000786,1.84e-34,1;CL:0000980,1.84e-34,1;CL:0000838,3.32e-23,52;CL:0000542,8.88e-23,53;CL:0000051,8.88e-23,53;CL:0000785,5.48e-18,2;CL:0000955,5.48e-18,2;CL:0000818,5.48e-18,2;CL:0000954,5.48e-18,2;CL:0000816,5.48e-18,2;CL:0000817,1.85e-12,3;CL:0002087,1.15e-10,115;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;5.48e-18;2!CL:0000051;1.91e-13;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.88e-11!10;DOID:630!1.75e-08!1;DOID:0050177!1.75e-08!1;DOID:0050427!1.75e-08!1;DOID:12603!2.02e-08!1;DOID:4960!3.57e-08!1;DOID:0070004!3.57e-08!1;DOID:2355!6.24e-08!1 | |ontology_enrichment_disease=DOID:0060058!2.88e-11!10;DOID:630!1.75e-08!1;DOID:0050177!1.75e-08!1;DOID:0050427!1.75e-08!1;DOID:12603!2.02e-08!1;DOID:4960!3.57e-08!1;DOID:0070004!3.57e-08!1;DOID:2355!6.24e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!2.69e-08!1;UBERON:0006518!2.69e-08!1;UBERON:0008949!2.69e-08!1;UBERON:0000101!2.69e-08!1;UBERON:0002167!2.69e-08!1;UBERON:0002506!3.83e-08!1;UBERON:0001769!3.83e-08!1;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1;UBERON:0001708!7.18e-08!4;UBERON:0001704!7.18e-08!4 | |ontology_enrichment_uberon=UBERON:0002171!2.69e-08!1;UBERON:0006518!2.69e-08!1;UBERON:0008949!2.69e-08!1;UBERON:0000101!2.69e-08!1;UBERON:0002167!2.69e-08!1;UBERON:0002506!3.83e-08!1;UBERON:0001769!3.83e-08!1;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1;UBERON:0001708!7.18e-08!4;UBERON:0001704!7.18e-08!4 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,2.54511827294832,2.44003422072406,0,0,0,0,0,0,1.16200800870452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,2.27653898714925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07029545245429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.434523000071005,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,2.54511827294832,2.44003422072406,0,0,0,0,0,0,1.16200800870452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,2.27653898714925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07029545245429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.434523000071005,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | ||
|short_description=p@chr3:6759235..6759249,+ | |short_description=p@chr3:6759235..6759249,+ | ||
}} | }} |
Latest revision as of 23:17, 29 July 2015
Short description: | p@chr3:6759235..6759249, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:6759235..6759249, + |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.20e-34 | 24 |
pro-B cell | 1.20e-34 | 24 |
antibody secreting cell | 1.84e-34 | 1 |
plasma cell | 1.84e-34 | 1 |
plasmablast | 1.84e-34 | 1 |
lymphoid lineage restricted progenitor cell | 3.32e-23 | 52 |
lymphocyte | 8.88e-23 | 53 |
common lymphoid progenitor | 8.88e-23 | 53 |
mature B cell | 5.48e-18 | 2 |
pre-B-II cell | 5.48e-18 | 2 |
transitional stage B cell | 5.48e-18 | 2 |
small pre-B-II cell | 5.48e-18 | 2 |
immature B cell | 5.48e-18 | 2 |
precursor B cell | 1.85e-12 | 3 |
nongranular leukocyte | 1.15e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |