FFCP PHASE1:Hg19::chr4:110834033..110834047,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1950 | |EntrezGene=1950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3229 | |HGNC=3229 | ||
|TSSclassifier=strong | |||
|UniProt=P01133,E7EVD2 | |UniProt=P01133,E7EVD2 | ||
|association_with_transcript=0bp_to_ENST00000265171,ENST00000509793,NM_001178130,NM_001178131,NM_001963,uc003hzy.3,uc011cfu.1,uc011cfv.1_5end | |association_with_transcript=0bp_to_ENST00000265171,ENST00000509793,NM_001178130,NM_001178131,NM_001963,uc003hzy.3,uc011cfu.1,uc011cfv.1_5end | ||
|cluster_id=chr4:110834033..110834047,+ | |||
|coexpression_cluster_id=C27 | |coexpression_cluster_id=C27 | ||
|description=CAGE_peak_1_at_EGF_5end | |description=CAGE_peak_1_at_EGF_5end | ||
|id=chr4:110834033..110834047,+ | |id=chr4:110834033..110834047,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;5.43e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.39e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.30e-24!115;UBERON:0005743!1.36e-11!86;UBERON:0001017!2.36e-11!82;UBERON:0001049!1.97e-10!57;UBERON:0005068!1.97e-10!57;UBERON:0006241!1.97e-10!57;UBERON:0007135!1.97e-10!57;UBERON:0000073!2.36e-10!94;UBERON:0001016!2.36e-10!94;UBERON:0002346!3.30e-10!90;UBERON:0000955!1.72e-09!69;UBERON:0006238!1.72e-09!69;UBERON:0003075!1.79e-09!86;UBERON:0007284!1.79e-09!86;UBERON:0000062!3.13e-09!511;UBERON:0002616!2.58e-08!59;UBERON:0000153!3.35e-08!129;UBERON:0007811!3.35e-08!129;UBERON:0000924!7.63e-08!173;UBERON:0006601!7.63e-08!173;UBERON:0000033!8.31e-08!123;UBERON:0002020!1.05e-07!34;UBERON:0003528!1.05e-07!34;UBERON:0001893!1.11e-07!34;UBERON:0000922!1.13e-07!612;UBERON:0003080!1.50e-07!42;UBERON:0000468!2.04e-07!659;UBERON:0002791!2.29e-07!33;UBERON:0004121!2.93e-07!169;UBERON:0002780!4.49e-07!41;UBERON:0001890!4.49e-07!41;UBERON:0006240!4.49e-07!41;UBERON:0003056!5.89e-07!61;UBERON:0001869!9.55e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!2.30e-24!115;UBERON:0005743!1.36e-11!86;UBERON:0001017!2.36e-11!82;UBERON:0001049!1.97e-10!57;UBERON:0005068!1.97e-10!57;UBERON:0006241!1.97e-10!57;UBERON:0007135!1.97e-10!57;UBERON:0000073!2.36e-10!94;UBERON:0001016!2.36e-10!94;UBERON:0002346!3.30e-10!90;UBERON:0000955!1.72e-09!69;UBERON:0006238!1.72e-09!69;UBERON:0003075!1.79e-09!86;UBERON:0007284!1.79e-09!86;UBERON:0000062!3.13e-09!511;UBERON:0002616!2.58e-08!59;UBERON:0000153!3.35e-08!129;UBERON:0007811!3.35e-08!129;UBERON:0000924!7.63e-08!173;UBERON:0006601!7.63e-08!173;UBERON:0000033!8.31e-08!123;UBERON:0002020!1.05e-07!34;UBERON:0003528!1.05e-07!34;UBERON:0001893!1.11e-07!34;UBERON:0000922!1.13e-07!612;UBERON:0003080!1.50e-07!42;UBERON:0000468!2.04e-07!659;UBERON:0002791!2.29e-07!33;UBERON:0004121!2.93e-07!169;UBERON:0002780!4.49e-07!41;UBERON:0001890!4.49e-07!41;UBERON:0006240!4.49e-07!41;UBERON:0003056!5.89e-07!61;UBERON:0001869!9.55e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0005090;8.21e-09;2!UBERON:0001630;8.21e-09;2!UBERON:0001829;9.72e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.07e-11,114;UBERON:0005090,8.55e-09,2;UBERON:0001630,8.55e-09,2;UBERON:0001829,1.07e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0.768482119587302,0,0,0,0,0,0.818718450173537,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,1.13477044938228,1.24564449799115,0.251248665256743,0.521482918420201,0.217188844705117,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.351339142772504,5.43563163315507,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0.286804595389004,0.487894824518382,0,0.464775771478074,0.829288440122964,1.51392510525377,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0,0,0,0,0.858486162094873,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,1.24324654030811,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0.606255142892519,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0.184161977871793,0.34444334449382,0,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.721287081534056,1.09883357782012,1.23764249880882,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.714695326373367,0,0,0,2.37937552888281,0,0,2.94048259177238,0,0,0,0,0,1.7235483311913,2.11673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.447352215784832,0.166849141711909,0,0.278406173895242,0,0.811367035427949,1.6653598399891,0,0,0.439524537815682,0,0,0,1.67121139316383,0.296964680832639,0,1.9882952955326,0.562677665642051,0,0,0,0.398495976502139,0,0,0.613612095012929,0,0,0.0898683511473268,3.75944466818779,0,0.394573622547734,0,0,0,0.278304294485554,0,0,0.0874599999961957,0.724999575434793,0.227586896570999,1.77977555204936,3.30942754475111,0,0.583209226766509,0,1.77148277162768,0.120596438625408,0,0.221158519862449,0.295547618953547,0.438770794307945,0.10893846351899,0,0.307801034015188,0,0,0,0,0,0,0,0,0.470940769185074,0.166211681900156,0.225595660617181,0,0,0,0.158936578980379,0,0.652931232636591,0.141353071433941,0.432777279484182,0,0,1.22206028986725,0,0,0,0.337005664903385,4.01288823649394,0,0,0,0.242780379534093,0,15.7287930863263,0,0,0.450970258243478,0.72581733978073,0,0,0,0,4.55375273647668,0,0,0,0,1.92199335066233,0,0.483781656445426,0.0730893170861856,0.0821154570532092,0.678923115418936,0,4.74559555639118,0.274083849293502,0,0.126621591911757,0.586654148204409,1.60317640503067,0,0,0,0.229073192331831,0,0,0.372757606696298,0.235694034616795,0.407712618220842,0.104602846312333,1.63197148218115,0,0,0,0,0,0,0.837847203816763,0.687481272035051,0,1.39775300349294,2.14613024068285,2.23171457441873,2.68733889946905,0,0,0.157566364614447,0,0,0.393709926058995,0,0.795229689809303,0.817220436669454,0.964518890790115,0.825236619583403,0,0,0,0.242998226632099,0,13.5545816554621,13.3234653862895,0.105600336519406,1.6135860539956,0,1.42939065274673,1.32418394073086,0,0.542999601753713,0,0.326587360109409,0,0,0.340776043570843,0.339936274560377,0,0,0.646414781807753,0.13223260174269,0.342173675768659,2.11444506695002,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.976210119215705,0.500763722825999,1.72022758707021,0.887432412294818,0.310482014706917,0.691743174681154,0.124980407962107,0.454947352624943,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0.318593534327405,0,0,0,0.797525143673985,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0.231522474323834,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0.303859956177382,0.276516872303462,0,0,0,0,0.491545817507439,0,0,0,0.172214979660816,0,0.920529751259204,0,0,0,0,0.314531883711793,0,0.169732529954025,0.212574920101683,6.44465974146811,1.11728983594649,0,0,0.80057074828547,0,0,0,0,0.638535436228605,0,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0.762764190934334,0,0.795664888465099,0,0,33.605102483023,0,0,0.739280431085226,0.270150338473579,0,0.206686796501184,0.317079050969534,0,9.86863980342928,2.48105589194647,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0.514464028312255,0.475788130837822,0.131545547125698,0.354581522651905,0.667388411352415,0.39246546425257,0.471346769748006,0,0,2.15927591218621,0,3.64530375300947,0,0,0.173858272302579,0,0.414432328326074,0.17071847709395,0,1.29068207646083,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.121917924982269,7.12171720906684,6.7757452525123,3.4794432940146,0.485710993059139,0.233939463462106,0,0,3.16249029709088,0.219881033490858,0,0,5.90110813360685,0,1.71603825227734,0.707029641304878,0.392616934229891,0.594092800654172,0.4226557275834,0,0,0.0644578879735772,0,0.535661815816973,0.352894871715692,0,0,3.21110498383179,1.14671666521161,0,0.203974470572744,0.872701380680755,12.1676173318542,0,0,0,0.504665699340316,0.218531143927391,0,0.815910637935854,0.801652215796681,0.0918948995348449,0.50141507858475,0.303114792872958,0,0,0.103432995861895,3.41174371041569,0.952257725854961,0,0.124149428591716,0.448527450322454,0.700118741059814,0.606351566874658,1.95945073107265,3.42233301085281,0.471464371102113,0.860666464712116,0.99798106963804,0,0.106727345877715,0,0,0,0.122241444182866,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0.768482119587302,0,0,0,0,0,0.818718450173537,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,1.13477044938228,1.24564449799115,0.251248665256743,0.521482918420201,0.217188844705117,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.351339142772504,5.43563163315507,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0.286804595389004,0.487894824518382,0,0.464775771478074,0.829288440122964,1.51392510525377,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0,0,0,0,0.858486162094873,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,1.24324654030811,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0.606255142892519,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0.184161977871793,0.34444334449382,0,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.721287081534056,1.09883357782012,1.23764249880882,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.714695326373367,0,0,0,2.37937552888281,0,0,2.94048259177238,0,0,0,0,0,1.7235483311913,2.11673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.447352215784832,0.166849141711909,0,0.278406173895242,0,0.811367035427949,1.6653598399891,0,0,0.439524537815682,0,0,0,1.67121139316383,0.296964680832639,0,1.9882952955326,0.562677665642051,0,0,0,0.398495976502139,0,0,0.613612095012929,0,0,0.0898683511473268,3.75944466818779,0,0.394573622547734,0,0,0,0.278304294485554,0,0,0.0874599999961957,0.724999575434793,0.227586896570999,1.77977555204936,3.30942754475111,0,0.583209226766509,0,1.77148277162768,0.120596438625408,0,0.221158519862449,0.295547618953547,0.438770794307945,0.10893846351899,0,0.307801034015188,0,0,0,0,0,0,0,0,0.470940769185074,0.166211681900156,0.225595660617181,0,0,0,0.158936578980379,0,0.652931232636591,0.141353071433941,0.432777279484182,0,0,1.22206028986725,0,0,0,0.337005664903385,4.01288823649394,0,0,0,0.242780379534093,0,15.7287930863263,0,0,0.450970258243478,0.72581733978073,0,0,0,0,4.55375273647668,0,0,0,0,1.92199335066233,0,0.483781656445426,0.0730893170861856,0.0821154570532092,0.678923115418936,0,4.74559555639118,0.274083849293502,0,0.126621591911757,0.586654148204409,1.60317640503067,0,0,0,0.229073192331831,0,0,0.372757606696298,0.235694034616795,0.407712618220842,0.104602846312333,1.63197148218115,0,0,0,0,0,0,0.837847203816763,0.687481272035051,0,1.39775300349294,2.14613024068285,2.23171457441873,2.68733889946905,0,0,0.157566364614447,0,0,0.393709926058995,0,0.795229689809303,0.817220436669454,0.964518890790115,0.825236619583403,0,0,0,0.242998226632099,0,13.5545816554621,13.3234653862895,0.105600336519406,1.6135860539956,0,1.42939065274673,1.32418394073086,0,0.542999601753713,0,0.326587360109409,0,0,0.340776043570843,0.339936274560377,0,0,0.646414781807753,0.13223260174269,0.342173675768659,2.11444506695002,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.976210119215705,0.500763722825999,1.72022758707021,0.887432412294818,0.310482014706917,0.691743174681154,0.124980407962107,0.454947352624943,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0.318593534327405,0,0,0,0.797525143673985,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0.231522474323834,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0.303859956177382,0.276516872303462,0,0,0,0,0.491545817507439,0,0,0,0.172214979660816,0,0.920529751259204,0,0,0,0,0.314531883711793,0,0.169732529954025,0.212574920101683,6.44465974146811,1.11728983594649,0,0,0.80057074828547,0,0,0,0,0.638535436228605,0,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0.762764190934334,0,0.795664888465099,0,0,33.605102483023,0,0,0.739280431085226,0.270150338473579,0,0.206686796501184,0.317079050969534,0,9.86863980342928,2.48105589194647,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0.514464028312255,0.475788130837822,0.131545547125698,0.354581522651905,0.667388411352415,0.39246546425257,0.471346769748006,0,0,2.15927591218621,0,3.64530375300947,0,0,0.173858272302579,0,0.414432328326074,0.17071847709395,0,1.29068207646083,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.121917924982269,7.12171720906684,6.7757452525123,3.4794432940146,0.485710993059139,0.233939463462106,0,0,3.16249029709088,0.219881033490858,0,0,5.90110813360685,0,1.71603825227734,0.707029641304878,0.392616934229891,0.594092800654172,0.4226557275834,0,0,0.0644578879735772,0,0.535661815816973,0.352894871715692,0,0,3.21110498383179,1.14671666521161,0,0.203974470572744,0.872701380680755,12.1676173318542,0,0,0,0.504665699340316,0.218531143927391,0,0.815910637935854,0.801652215796681,0.0918948995348449,0.50141507858475,0.303114792872958,0,0,0.103432995861895,3.41174371041569,0.952257725854961,0,0.124149428591716,0.448527450322454,0.700118741059814,0.606351566874658,1.95945073107265,3.42233301085281,0.471464371102113,0.860666464712116,0.99798106963804,0,0.106727345877715,0,0,0,0.122241444182866,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p1@EGF | |short_description=p1@EGF | ||
}} | }} |
Latest revision as of 16:39, 24 September 2015
Short description: | p1@EGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EGF_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000265171, ENST00000509793, NM_001178130, NM_001178131, NM_001963, uc003hzy.3, uc011cfu.1, uc011cfv.1_5end |
EntrezGene: | EGF |
HGNC: | 3229 |
UniProt: | P01133E7EVD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.07e-11 | 114 |
muscle structure | 8.55e-09 | 2 |
muscle organ | 8.55e-09 | 2 |
major salivary gland | 1.07e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.39e-08 | 2 |