FFCP PHASE1:Hg19::chr4:125341514..125341526,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:125341514..125341526,- | |||
|coexpression_cluster_id=C655 | |coexpression_cluster_id=C655 | ||
|description=CAGE_peak_at_chr4:125341514..125341526,- | |description=CAGE_peak_at_chr4:125341514..125341526,- | ||
|id=chr4:125341514..125341526,- | |id=chr4:125341514..125341526,- | ||
|ontology_enrichment_celltype=CL:0000244!1.17e-22!4;CL:0000731!1.17e-22!4;CL:0002504!2.82e-13!3;CL:1000279!2.82e-13!3;CL:1000280!2.82e-13!3;CL:0000319!5.05e-11!1;CL:1001319!8.22e-11!1;CL:1000600!8.22e-11!1 | |ontology_enrichment_celltype=CL:0000244!1.17e-22!4;CL:0000731!1.17e-22!4;CL:0002504!2.82e-13!3;CL:1000279!2.82e-13!3;CL:1000280!2.82e-13!3;CL:0000319!5.05e-11!1;CL:1001319!8.22e-11!1;CL:1000600!8.22e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0000244;8.53e-64;4!CL:0000731;8.53e-64;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.18e-63,4;CL:0000731,1.18e-63,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3030!5.05e-11!1;DOID:0060085!9.05e-11!1;DOID:3165!9.05e-11!1;DOID:0060121!9.05e-11!1;DOID:2438!9.05e-11!1;DOID:4418!9.05e-11!1 | |ontology_enrichment_disease=DOID:3030!5.05e-11!1;DOID:0060085!9.05e-11!1;DOID:3165!9.05e-11!1;DOID:0060121!9.05e-11!1;DOID:2438!9.05e-11!1;DOID:4418!9.05e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!2.85e-31!5;UBERON:0005910!4.05e-26!6;UBERON:0001255!3.67e-20!2;UBERON:0001556!3.67e-20!2;UBERON:0001046!1.65e-12!19;UBERON:0000162!3.55e-11!14;UBERON:0001353!3.55e-11!14;UBERON:0000163!3.55e-11!14;UBERON:0006866!3.55e-11!14;UBERON:0000164!3.55e-11!14;UBERON:0000931!3.55e-11!14;UBERON:0004645!8.22e-11!1;UBERON:0001256!8.22e-11!1;UBERON:0001259!8.22e-11!1;UBERON:0004122!1.92e-10!15;UBERON:0006554!4.71e-10!44;UBERON:0001008!8.18e-10!45;UBERON:0000059!3.15e-08!11 | |ontology_enrichment_uberon=UBERON:0000365!2.85e-31!5;UBERON:0005910!4.05e-26!6;UBERON:0001255!3.67e-20!2;UBERON:0001556!3.67e-20!2;UBERON:0001046!1.65e-12!19;UBERON:0000162!3.55e-11!14;UBERON:0001353!3.55e-11!14;UBERON:0000163!3.55e-11!14;UBERON:0006866!3.55e-11!14;UBERON:0000164!3.55e-11!14;UBERON:0000931!3.55e-11!14;UBERON:0004645!8.22e-11!1;UBERON:0001256!8.22e-11!1;UBERON:0001259!8.22e-11!1;UBERON:0004122!1.92e-10!15;UBERON:0006554!4.71e-10!44;UBERON:0001008!8.18e-10!45;UBERON:0000059!3.15e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.98e-51;5!UBERON:0005910;6.96e-43;6!UBERON:0000486;6.55e-22;12!UBERON:0006554;1.45e-15;30!UBERON:0001008;1.45e-15;30!UBERON:0001255;2.37e-15;2!UBERON:0001556;2.37e-15;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.85e-51,5;UBERON:0005910,8.63e-43,6;UBERON:0001255,2.37e-15,2;UBERON:0001556,2.37e-15,2;UBERON:0006554,4.16e-10,47;UBERON:0001008,6.61e-10,48 | |||
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|short_description=p@chr4:125341514..125341526,- | |short_description=p@chr4:125341514..125341526,- | ||
}} | }} |
Latest revision as of 01:27, 30 July 2015
Short description: | p@chr4:125341514..125341526, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:125341514..125341526, - |
Coexpression cluster: | C655_mesothelioma_Mesothelial_hepatoma_cholangiocellular_Urothelial_glioma_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.18e-63 | 4 |
urothelial cell | 1.18e-63 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.85e-51 | 5 |
transitional epithelium | 8.63e-43 | 6 |
urinary bladder | 2.37e-15 | 2 |
lower urinary tract | 2.37e-15 | 2 |
urinary system structure | 4.16e-10 | 47 |
renal system | 6.61e-10 | 48 |