FFCP PHASE1:Hg19::chr4:73248974..73249005,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:73248974..73249005,+ | |||
|coexpression_cluster_id=C785 | |coexpression_cluster_id=C785 | ||
|description=CAGE_peak_at_chr4:73248974..73249005,+ | |description=CAGE_peak_at_chr4:73248974..73249005,+ | ||
|id=chr4:73248974..73249005,+ | |id=chr4:73248974..73249005,+ | ||
|ontology_enrichment_celltype=CL:0002620!9.13e-18!23;CL:0000057!4.01e-08!75 | |ontology_enrichment_celltype=CL:0002620!9.13e-18!23;CL:0000057!4.01e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000222;2.42e-50;1!CL:0002563;1.29e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.29e-13,4 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.26e-11;5 | |||
|ontology_enrichment_disease=DOID:17!5.36e-16!5;DOID:450!5.36e-16!5;DOID:66!5.36e-16!5;DOID:423!5.36e-16!5;DOID:0080000!5.36e-16!5;DOID:11722!5.36e-16!5;DOID:2513!1.65e-10!1;DOID:3112!1.98e-10!1 | |ontology_enrichment_disease=DOID:17!5.36e-16!5;DOID:450!5.36e-16!5;DOID:66!5.36e-16!5;DOID:423!5.36e-16!5;DOID:0080000!5.36e-16!5;DOID:11722!5.36e-16!5;DOID:2513!1.65e-10!1;DOID:3112!1.98e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:2513;1.46e-50;1!DOID:3112;3.99e-50;1!DOID:3451;4.32e-26;2!DOID:4159;4.32e-26;2!DOID:0060122;4.32e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.46e-50,1;DOID:3112,3.99e-50,1;DOID:3451,4.32e-26,2;DOID:4159,4.32e-26,2;DOID:0060122,4.32e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.86e-13!40;UBERON:0002199!2.09e-11!45;UBERON:0002416!2.09e-11!45;UBERON:0003102!1.14e-07!95 | |ontology_enrichment_uberon=UBERON:0002097!5.86e-13!40;UBERON:0002199!2.09e-11!45;UBERON:0002416!2.09e-11!45;UBERON:0003102!1.14e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0000014;8.82e-14;4!UBERON:0001242;1.29e-13;4!UBERON:0001262;1.29e-13;4!UBERON:0004786;1.29e-13;4!UBERON:0004808;1.29e-13;4!UBERON:0001277;1.29e-13;4!UBERON:0002046;3.26e-11;5!UBERON:0000485;2.35e-08;7!UBERON:0003929;2.35e-08;7!UBERON:0003350;1.80e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.82e-14,4;UBERON:0001242,1.29e-13,4;UBERON:0001262,1.29e-13,4;UBERON:0004786,1.29e-13,4;UBERON:0004808,1.29e-13,4;UBERON:0001277,1.29e-13,4;UBERON:0002046,3.26e-11,5;UBERON:0004117,3.26e-11,5;UBERON:0007689,3.26e-11,5;UBERON:0007123,3.26e-11,5;UBERON:0003091,3.26e-11,5;UBERON:0003350,1.80e-07,8;UBERON:0000485,8.85e-07,9 | |||
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|short_description=p@chr4:73248974..73249005,+ | |short_description=p@chr4:73248974..73249005,+ | ||
}} | }} |
Latest revision as of 06:30, 30 July 2015
Short description: | p@chr4:73248974..73249005, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:73248974..73249005, + |
Coexpression cluster: | C785_basal_mesenchymal_chorionic_leiomyoma_mesodermal_Fibroblast_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 8.82e-14 | 4 |
intestinal mucosa | 1.29e-13 | 4 |
wall of intestine | 1.29e-13 | 4 |
gastrointestinal system mucosa | 1.29e-13 | 4 |
gastrointestinal system epithelium | 1.29e-13 | 4 |
intestinal epithelium | 1.29e-13 | 4 |
thyroid gland | 3.26e-11 | 5 |
pharyngeal pouch | 3.26e-11 | 5 |
thyroid diverticulum | 3.26e-11 | 5 |
pharyngeal pouch 2 | 3.26e-11 | 5 |
thyroid primordium | 3.26e-11 | 5 |
epithelium of mucosa | 1.80e-07 | 8 |
simple columnar epithelium | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.46e-50 | 1 |
papillary adenocarcinoma | 3.99e-50 | 1 |
skin carcinoma | 4.32e-26 | 2 |
skin cancer | 4.32e-26 | 2 |
integumentary system cancer | 4.32e-26 | 2 |