FFCP PHASE1:Hg19::chr5:137610117..137610157,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2676 | |EntrezGene=2676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4245 | |HGNC=4245 | ||
|TSSclassifier=strong | |||
|UniProt=O60609 | |UniProt=O60609 | ||
|association_with_transcript=95bp_to_NM_001496,uc003lcn.2,uc003lco.2_5end | |association_with_transcript=95bp_to_NM_001496,uc003lcn.2,uc003lco.2_5end | ||
|cluster_id=chr5:137610117..137610157,- | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_2_at_GFRA3_5end | |description=CAGE_peak_2_at_GFRA3_5end | ||
|id=chr5:137610117..137610157,- | |id=chr5:137610117..137610157,- | ||
|ontology_enrichment_celltype=CL:0002322!1.07e-08!5 | |ontology_enrichment_celltype=CL:0002322!1.07e-08!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.77e-07;1!UBERON:0004874;4.77e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.22e-07;1!DOID:1357;2.22e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.22e-07,1;DOID:1357,2.22e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.62e-23!115;UBERON:0003135!9.34e-08!11 | |ontology_enrichment_uberon=UBERON:0007023!2.62e-23!115;UBERON:0003135!9.34e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;9.75e-14;49!UBERON:0001829;8.56e-12;2!UBERON:0003978;2.33e-08;3!UBERON:0000946;2.33e-08;3!UBERON:0006947;2.33e-08;3!UBERON:0004054;2.33e-08;3!UBERON:0003135;2.92e-08;11!UBERON:0001764;2.22e-07;1!UBERON:0001825;2.22e-07;1!UBERON:0000989;4.77e-07;1!UBERON:0002135;4.77e-07;1!UBERON:0001301;4.77e-07;1!UBERON:0008811;4.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,7.26e-12,2;UBERON:0003978,2.16e-08,3;UBERON:0009751,2.16e-08,3;UBERON:0000946,2.16e-08,3;UBERON:0002523,2.16e-08,3;UBERON:0005983,2.16e-08,3;UBERON:0002165,2.16e-08,3;UBERON:0002062,2.16e-08,3;UBERON:0007280,2.16e-08,3;UBERON:0006947,3.25e-08,3;UBERON:0004054,3.25e-08,3;UBERON:0003135,3.62e-08,11;UBERON:0001764,2.22e-07,1;UBERON:0001825,2.22e-07,1;UBERON:0002135,3.78e-07,1;UBERON:0000989,4.25e-07,1;UBERON:0008811,4.25e-07,1;UBERON:0006258,4.25e-07,1;UBERON:0005876,4.25e-07,1;UBERON:0004874,4.25e-07,1;UBERON:0001301,5.69e-07,1;UBERON:0007029,6.76e-07,1;UBERON:0001831,8.02e-07,1;UBERON:0001567,8.02e-07,1;UBERON:0008801,8.02e-07,1;UBERON:0002426,8.49e-07,1;UBERON:0003831,8.49e-07,1;UBERON:0003898,8.49e-07,1;UBERON:0004830,8.49e-07,1;UBERON:0003830,8.49e-07,1;UBERON:0005175,8.49e-07,1;UBERON:0001774,8.49e-07,1;UBERON:0001103,8.49e-07,1;UBERON:0010084,8.49e-07,1 | |||
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| ||
|short_description=p2@GFRA3 | |short_description=p2@GFRA3 | ||
}} | }} |
Latest revision as of 22:05, 24 September 2015
Short description: | p2@GFRA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GFRA3_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 95bp_to_NM_001496, uc003lcn.2, uc003lco.2_5end |
EntrezGene: | GFRA3 |
HGNC: | 4245 |
UniProt: | O60609 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 7.26e-12 | 2 |
valve | 2.16e-08 | 3 |
cardiac mesenchyme | 2.16e-08 | 3 |
cardial valve | 2.16e-08 | 3 |
tunica intima | 2.16e-08 | 3 |
heart layer | 2.16e-08 | 3 |
endocardium | 2.16e-08 | 3 |
endocardial cushion | 2.16e-08 | 3 |
presumptive endocardium | 2.16e-08 | 3 |
male genital duct | 3.25e-08 | 3 |
internal male genitalia | 3.25e-08 | 3 |
male reproductive organ | 3.62e-08 | 11 |
maxillary sinus | 2.22e-07 | 1 |
paranasal sinus | 2.22e-07 | 1 |
mitral valve | 3.78e-07 | 1 |
penis | 4.25e-07 | 1 |
intromittent organ | 4.25e-07 | 1 |
lateral plate mesenchyme | 4.25e-07 | 1 |
undifferentiated genital tubercle | 4.25e-07 | 1 |
somatopleure | 4.25e-07 | 1 |
epididymis | 5.69e-07 | 1 |
surface | 6.76e-07 | 1 |
parotid gland | 8.02e-07 | 1 |
cheek | 8.02e-07 | 1 |
parotid gland primordium | 8.02e-07 | 1 |
chest muscle | 8.49e-07 | 1 |
respiratory system muscle | 8.49e-07 | 1 |
skeletal muscle of trunk | 8.49e-07 | 1 |
respiratory system skeletal muscle | 8.49e-07 | 1 |
thoracic segment muscle | 8.49e-07 | 1 |
chest organ | 8.49e-07 | 1 |
muscle of trunk | 8.49e-07 | 1 |
diaphragm | 8.49e-07 | 1 |
future diaphragm | 8.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.22e-07 | 1 |
maxillary sinus cancer | 2.22e-07 | 1 |