FFCP PHASE1:Hg19::chr5:78365545..78365572,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23743 | |EntrezGene=23743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1048 | |HGNC=1048 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z516,Q9H2M3 | |UniProt=B7Z516,Q9H2M3 | ||
|association_with_transcript=0bp_to_NM_001178005,NM_017614_5end | |association_with_transcript=0bp_to_NM_001178005,NM_017614_5end | ||
|cluster_id=chr5:78365545..78365572,+ | |||
|coexpression_cluster_id=C2830 | |coexpression_cluster_id=C2830 | ||
|description=CAGE_peak_2_at_BHMT2_5end | |description=CAGE_peak_2_at_BHMT2_5end | ||
|id=chr5:78365545..78365572,+ | |id=chr5:78365545..78365572,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.86e-09!75;CL:0000136!7.16e-08!15;CL:0002334!3.71e-07!12 | |ontology_enrichment_celltype=CL:0000057!1.86e-09!75;CL:0000136!7.16e-08!15;CL:0002334!3.71e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.19e-11;13!CL:0000182;5.36e-08;12!CL:0002334;5.06e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.67e-12,15;CL:0000182,5.85e-08,12;CL:0002334,4.33e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.23e-11;31!UBERON:0004161;1.45e-10;11!UBERON:0009497;1.61e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.14e-25!115;UBERON:0000475!1.89e-19!365;UBERON:0000481!2.58e-14!347;UBERON:0003075!1.26e-13!86;UBERON:0007284!1.26e-13!86;UBERON:0000119!3.17e-12!312;UBERON:0002346!4.40e-12!90;UBERON:0000483!6.68e-12!309;UBERON:0002616!1.41e-11!59;UBERON:0001049!1.99e-11!57;UBERON:0005068!1.99e-11!57;UBERON:0006241!1.99e-11!57;UBERON:0007135!1.99e-11!57;UBERON:0003056!2.66e-11!61;UBERON:0000477!4.93e-11!286;UBERON:0000468!2.11e-10!659;UBERON:0000153!2.89e-09!129;UBERON:0007811!2.89e-09!129;UBERON:0003080!3.37e-09!42;UBERON:0000479!3.69e-09!787;UBERON:0000033!5.76e-09!123;UBERON:0005743!9.23e-09!86;UBERON:0002780!1.18e-08!41;UBERON:0001890!1.18e-08!41;UBERON:0006240!1.18e-08!41;UBERON:0004111!1.24e-08!241;UBERON:0005256!1.52e-08!143;UBERON:0000467!1.59e-08!625;UBERON:0000480!2.13e-08!626;UBERON:0000062!3.47e-08!511;UBERON:0000073!4.68e-08!94;UBERON:0001016!4.68e-08!94;UBERON:0002100!5.51e-08!216;UBERON:0000955!6.60e-08!69;UBERON:0006238!6.60e-08!69;UBERON:0000025!1.04e-07!194;UBERON:0001017!1.37e-07!82;UBERON:0002107!1.40e-07!19;UBERON:0006925!1.40e-07!19;UBERON:0008836!1.40e-07!19;UBERON:0004121!2.48e-07!169;UBERON:0002417!3.78e-07!61;UBERON:0000916!3.78e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!3.14e-25!115;UBERON:0000475!1.89e-19!365;UBERON:0000481!2.58e-14!347;UBERON:0003075!1.26e-13!86;UBERON:0007284!1.26e-13!86;UBERON:0000119!3.17e-12!312;UBERON:0002346!4.40e-12!90;UBERON:0000483!6.68e-12!309;UBERON:0002616!1.41e-11!59;UBERON:0001049!1.99e-11!57;UBERON:0005068!1.99e-11!57;UBERON:0006241!1.99e-11!57;UBERON:0007135!1.99e-11!57;UBERON:0003056!2.66e-11!61;UBERON:0000477!4.93e-11!286;UBERON:0000468!2.11e-10!659;UBERON:0000153!2.89e-09!129;UBERON:0007811!2.89e-09!129;UBERON:0003080!3.37e-09!42;UBERON:0000479!3.69e-09!787;UBERON:0000033!5.76e-09!123;UBERON:0005743!9.23e-09!86;UBERON:0002780!1.18e-08!41;UBERON:0001890!1.18e-08!41;UBERON:0006240!1.18e-08!41;UBERON:0004111!1.24e-08!241;UBERON:0005256!1.52e-08!143;UBERON:0000467!1.59e-08!625;UBERON:0000480!2.13e-08!626;UBERON:0000062!3.47e-08!511;UBERON:0000073!4.68e-08!94;UBERON:0001016!4.68e-08!94;UBERON:0002100!5.51e-08!216;UBERON:0000955!6.60e-08!69;UBERON:0006238!6.60e-08!69;UBERON:0000025!1.04e-07!194;UBERON:0001017!1.37e-07!82;UBERON:0002107!1.40e-07!19;UBERON:0006925!1.40e-07!19;UBERON:0008836!1.40e-07!19;UBERON:0004121!2.48e-07!169;UBERON:0002417!3.78e-07!61;UBERON:0000916!3.78e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.92e-09;19!UBERON:0006925;2.92e-09;19!UBERON:0001013;1.65e-08;14!UBERON:0002368;6.36e-08;33!UBERON:0002423;2.42e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.13e-20,114;UBERON:0002107,2.30e-09,19;UBERON:0006925,2.30e-09,19;UBERON:0008836,2.30e-09,19;UBERON:0002417,1.46e-08,60;UBERON:0000916,1.46e-08,60;UBERON:0001013,2.27e-08,14;UBERON:0009854,4.30e-08,23;UBERON:0002368,5.26e-08,35;UBERON:0000479,6.67e-08,773;UBERON:0008835,1.40e-07,22;UBERON:0003894,1.40e-07,22;UBERON:0009497,1.92e-07,25;UBERON:0000015,1.92e-07,25;UBERON:0002423,1.92e-07,25;UBERON:0006235,1.92e-07,25;UBERON:0004161,1.92e-07,25;UBERON:0005172,6.62e-07,54;UBERON:0005173,6.62e-07,54;UBERON:0003104,6.63e-07,160;UBERON:0009142,6.63e-07,160 | |||
|phase1_expression=1.2717486548939,5.78071414505655,3.52386010239928,0,1.78784437770915,3.48935409640147,0,3.15859936713415,1.82829939739887,0.491467873003018,0,0,0,0.74259811776028,2.98257638155124,0,0,0,0,0.123121058076788,0.408001382488506,0,0.572471974262113,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,0,0.722878304769133,0.50133791063589,1.73815822752988,0.795285947051099,0.486634870302636,1.13441780596881,0.443458794925128,1.14185221401064,5.56661070865279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20848795132744,0.760272105718513,0.24406205754817,0,0,0.535798369704479,0.673588117878509,1.46394924628319,0,0,0.183201743930407,0,0,0,0.993943903390637,0.12663051166458,0.926864265692532,0,0.354668382198357,0,0,0,0.311211035399766,0,0.490385709340376,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0,0.469737994575059,0.809364721840658,0.421352420106746,0,0.491337269247072,1.75653827998801,1.18800285728205,1.97813543422845,0.910161361938026,0.718618141816238,0.505008341862199,0.375355559615893,1.38532057742091,1.75591048352335,0.919463387397059,3.60571341375832,0,0.538168907066586,1.06778694409284,0.847727604638247,0.300091096084402,1.13357782162283,1.28820270022815,0.37223371266318,0.168776332241266,0.194874010322397,1.26216887122057,0.552299391853796,0.323292113637624,2.13005755509969,0.906768884048762,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,1.56449532329816,4.5026865673502,1.38134921352481,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,17.7457048750563,6.87979051674338,14.7697476670351,0,0,0.857839051492628,0,0,0,0,0.977424915930974,3.11980435583874,0,1.27523445472584,0.821860859650752,0.721832238805369,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,0.129271715757778,0,2.535908257668,3.19125739901845,1.04007436911366,0.257207374262142,0,0,0.428933980974443,0,0,1.30294473717494,0.355391948742546,0.791951872933429,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,1.42636905040718,0.434343920002738,0.205476322550383,0.537182889719687,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,1.10422342547226,2.50085260529839,0.813795071099207,0.415941723061614,0,0.630809660135739,0.468565659970853,0.601892199455438,2.27407504055985,0,0,0,2.78027566297865,1.17480694477644,0.343143423810856,0,0,0,0,0,0,0.744323423456331,6.59886485138669,4.49056151092918,2.05022638809122,2.04682899626681,0.482561763430822,2.96836132889982,2.00472601943452,0.532685175939381,1.64254312027618,1.55776328755086,2.90525946149898,0,0,0,1.14814448164607,0.182091168006717,1.57349297951309,0,1.07821471946181,0,0,0.527758144464379,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0.501689773854853,1.52925763827023,1.66215201785745,0.223874754722178,0,0,2.3080511260475,0.328014645699706,0.976135183992909,10.9223472346586,0,0,0,0,1.6068392984416,0.290012154876366,0.924291702687866,0.614014698904518,0.964856007391714,1.18162269355101,1.45016693914229,1.02271952899321,0.890320356467374,0,0,0,0,0.929691098594572,0,0,0,0,0,0,0.143124886741991,1.86079184679834,1.2655176988749,0.571890581771475,0,0,0,0,1.07923474549989,0,0.235624804691373,0.202182481573316,0,0,0.48763373908959,1.46228093778771,0,0.682499557039929,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,2.62357900818653,0,0,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,4.85547561184627,5.59801318031833,0.75894634753143,0.699869440489966,0,0,0,11.5796874955438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35096621849796,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,4.5827037297746,1.10513566212459,0.251932747854276,0,0,0.311039587661807,0,0,0,4.93217028184668,0,0,0,0.463840490809256,0,0,0,4.34999745260876,0,0,0,0,0,0,0,1.20596438625408,0,0.995213339381022,0.295547618953547,1.31631238292384,0.10893846351899,0,2.6163087891291,0,0,0,0,0.31900115973192,1.83195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,2.12298154808014,0.611030144933625,0,0,0,0.741412462787447,0,0.468528891450678,0,0,0,4.3404284313433,2.41981432097328,0,6.88733717950519,0,0,0,0,0,0,0,0,0,0,0,7.86270007089136,0,0,0,0,2.81268147816416,0,1.35588444468319,0,0,1.07628353124994,0,0,3.84215390530835,0,0,0,7.72177490378841,0,0,0,0,0,0,0,3.60252173225874,1.09524303113594,0,0.859530882839914,0,4.74780082162832,3.43740636017525,0,0.599037001496973,0.858452096273142,2.67805748930247,0.268733889946905,1.80149941771202,1.16495949527454,3.38767683921062,1.40106959247983,2.96575592958414,12.0081527447994,0,1.59045937961861,1.63444087333891,0,0.275078873194468,0,0,0,0.364497339948148,0,17.6524784350204,7.55346069143973,0,0,0,4.2881719582402,0,0,0,0,0.653174720218818,0,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| ||
|short_description=p2@BHMT2 | |short_description=p2@BHMT2 | ||
}} | }} |
Latest revision as of 21:03, 18 September 2015
Short description: | p2@BHMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BHMT2_5end |
Coexpression cluster: | C2830_mature_Hepatocyte_mesenchymal_liver_pleomorphic_pancreas_chorionic |
Association with transcript: | 0bp_to_NM_001178005, NM_017614_5end |
EntrezGene: | BHMT2 |
HGNC: | 1048 |
UniProt: | B7Z516Q9H2M3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.67e-12 | 15 |
hepatocyte | 5.85e-08 | 12 |
preadipocyte | 4.33e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.13e-20 | 114 |
liver | 2.30e-09 | 19 |
digestive gland | 2.30e-09 | 19 |
liver bud | 2.30e-09 | 19 |
abdominal segment of trunk | 1.46e-08 | 60 |
abdomen | 1.46e-08 | 60 |
adipose tissue | 2.27e-08 | 14 |
digestive tract diverticulum | 4.30e-08 | 23 |
endocrine gland | 5.26e-08 | 35 |
tissue | 6.67e-08 | 773 |
hepatic diverticulum | 1.40e-07 | 22 |
liver primordium | 1.40e-07 | 22 |
epithelium of foregut-midgut junction | 1.92e-07 | 25 |
anatomical boundary | 1.92e-07 | 25 |
hepatobiliary system | 1.92e-07 | 25 |
foregut-midgut junction | 1.92e-07 | 25 |
septum transversum | 1.92e-07 | 25 |
abdomen element | 6.62e-07 | 54 |
abdominal segment element | 6.62e-07 | 54 |
mesenchyme | 6.63e-07 | 160 |
entire embryonic mesenchyme | 6.63e-07 | 160 |