FFCP PHASE1:Hg19::chr6:165597234..165597249,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:165597234..165597249,- | |||
|coexpression_cluster_id=C206 | |coexpression_cluster_id=C206 | ||
|description=CAGE_peak_at_chr6:165597234..165597249,- | |description=CAGE_peak_at_chr6:165597234..165597249,- | ||
|id=chr6:165597234..165597249,- | |id=chr6:165597234..165597249,- | ||
|ontology_enrichment_celltype=CL:0000148!2.57e-33!10;CL:0000541!2.57e-33!10;CL:0000147!7.78e-24!14;CL:0000710!1.05e-16!20;CL:0002566!1.84e-14!1;CL:0000075!2.25e-12!27;CL:0000333!7.53e-11!41;CL:0002077!4.06e-10!33;CL:0000325!1.50e-08!39;CL:0000133!1.50e-07!59 | |ontology_enrichment_celltype=CL:0000148!2.57e-33!10;CL:0000541!2.57e-33!10;CL:0000147!7.78e-24!14;CL:0000710!1.05e-16!20;CL:0002566!1.84e-14!1;CL:0000075!2.25e-12!27;CL:0000333!7.53e-11!41;CL:0002077!4.06e-10!33;CL:0000325!1.50e-08!39;CL:0000133!1.50e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.93e-36;10!CL:0000147;4.86e-26;14!CL:0000710;1.60e-18;20!CL:0002567;1.60e-14;3!CL:0000075;5.92e-14;27!CL:0000149;3.42e-11;4!CL:0002077;2.41e-10;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.93e-36,10;CL:0000541,4.93e-36,10;CL:0000147,4.86e-26,14;CL:0000710,1.60e-18,20;CL:0002567,1.60e-14,3;CL:0000075,5.92e-14,27;CL:0002077,2.96e-11,34;CL:0000149,3.42e-11,4;CL:0000333,4.57e-09,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!3.14e-28!2;DOID:3493!5.37e-08!2 | |ontology_enrichment_disease=DOID:1909!3.14e-28!2;DOID:3493!5.37e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.05e-79;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.05e-79,2 | |||
|ontology_enrichment_uberon=UBERON:0002148!7.52e-08!2;UBERON:0009662!7.52e-08!2;UBERON:0002298!1.88e-07!8 | |ontology_enrichment_uberon=UBERON:0002148!7.52e-08!2;UBERON:0009662!7.52e-08!2;UBERON:0002298!1.88e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.15e-11;15!UBERON:0007376;1.15e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.15e-11,15;UBERON:0007376,1.15e-11,15;UBERON:0007383,1.15e-11,15 | |||
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|short_description=p@chr6:165597234..165597249,- | |short_description=p@chr6:165597234..165597249,- | ||
}} | }} |
Latest revision as of 22:01, 30 July 2015
Short description: | p@chr6:165597234..165597249, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:165597234..165597249, - |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.93e-36 | 10 |
melanoblast | 4.93e-36 | 10 |
pigment cell | 4.86e-26 | 14 |
neurecto-epithelial cell | 1.60e-18 | 20 |
light melanocyte | 1.60e-14 | 3 |
columnar/cuboidal epithelial cell | 5.92e-14 | 27 |
ecto-epithelial cell | 2.96e-11 | 34 |
visual pigment cell | 3.42e-11 | 4 |
migratory neural crest cell | 4.57e-09 | 41 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.15e-11 | 15 |
outer epithelium | 1.15e-11 | 15 |
enveloping layer of ectoderm | 1.15e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.05e-79 | 2 |