FFCP PHASE1:Hg19::chr6:27777819..27777836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8350,8351,8352,8353,8354,8355,8356,8357,8358,8968 | |EntrezGene=8350,8351,8352,8353,8354,8355,8356,8357,8358,8968 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4766,4767,4768,4769,4771,4772,4773,4774,4775,4776 | |HGNC=4766,4767,4768,4769,4771,4772,4773,4774,4775,4776 | ||
|TSSclassifier=strong | |||
|UniProt=P68431 | |UniProt=P68431 | ||
|association_with_transcript=-5bp_to_ENST00000369163,NM_003536_5end | |association_with_transcript=-5bp_to_ENST00000369163,NM_003536_5end | ||
|cluster_id=chr6:27777819..27777836,+ | |||
|coexpression_cluster_id=C241 | |coexpression_cluster_id=C241 | ||
|description=CAGE_peak_6_at_HIST1H3A_5end,CAGE_peak_6_at_HIST1H3B_5end,CAGE_peak_6_at_HIST1H3C_5end,CAGE_peak_6_at_HIST1H3D_5end,CAGE_peak_6_at_HIST1H3E_5end,CAGE_peak_6_at_HIST1H3F_5end,CAGE_peak_6_at_HIST1H3G_5end,CAGE_peak_6_at_HIST1H3I_5end,CAGE_peak_6_at_HIST1H3J_5end,CAGE_peak_7_at_HIST1H3H_5end | |description=CAGE_peak_6_at_HIST1H3A_5end,CAGE_peak_6_at_HIST1H3B_5end,CAGE_peak_6_at_HIST1H3C_5end,CAGE_peak_6_at_HIST1H3D_5end,CAGE_peak_6_at_HIST1H3E_5end,CAGE_peak_6_at_HIST1H3F_5end,CAGE_peak_6_at_HIST1H3G_5end,CAGE_peak_6_at_HIST1H3I_5end,CAGE_peak_6_at_HIST1H3J_5end,CAGE_peak_7_at_HIST1H3H_5end | ||
|id=chr6:27777819..27777836,+ | |id=chr6:27777819..27777836,+ | ||
|ontology_enrichment_celltype=CL:0000003!1.87e-13!722;CL:0000012!1.95e-12!682;CL:0000548!1.99e-11!679;CL:0000004!1.99e-11!679;CL:0000255!1.99e-11!679;CL:0000542!1.05e-08!53;CL:0000051!1.05e-08!53;CL:0000838!2.89e-08!52;CL:0000066!6.65e-08!254;CL:0002321!5.73e-07!248;CL:0000144!8.57e-07!625;CL:0000220!8.72e-07!246 | |ontology_enrichment_celltype=CL:0000003!1.87e-13!722;CL:0000012!1.95e-12!682;CL:0000548!1.99e-11!679;CL:0000004!1.99e-11!679;CL:0000255!1.99e-11!679;CL:0000542!1.05e-08!53;CL:0000051!1.05e-08!53;CL:0000838!2.89e-08!52;CL:0000066!6.65e-08!254;CL:0002321!5.73e-07!248;CL:0000144!8.57e-07!625;CL:0000220!8.72e-07!246 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.05e-08,53;CL:0000051,1.05e-08,53;CL:0000838,2.89e-08,52;CL:0000066,4.52e-08,253;CL:0002321,6.22e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!4.43e-21!51;DOID:0060083!4.43e-21!51;DOID:162!6.28e-21!235;DOID:14566!1.74e-19!239;DOID:1240!5.20e-17!39;DOID:8692!5.56e-13!31;DOID:0050686!6.10e-12!137;DOID:0050687!4.41e-07!143 | |ontology_enrichment_disease=DOID:2531!4.43e-21!51;DOID:0060083!4.43e-21!51;DOID:162!6.28e-21!235;DOID:14566!1.74e-19!239;DOID:1240!5.20e-17!39;DOID:8692!5.56e-13!31;DOID:0050686!6.10e-12!137;DOID:0050687!4.41e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.62e-13;39!DOID:2531;3.78e-13;51!DOID:0060083;3.78e-13;51!DOID:8692;1.35e-12;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.43e-21,51;DOID:0060083,4.43e-21,51;DOID:162,6.28e-21,235;DOID:14566,1.74e-19,239;DOID:1240,5.20e-17,39;DOID:8692,5.56e-13,31;DOID:0050686,6.10e-12,137;DOID:0050687,4.41e-07,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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703.00670362099 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|short_description=p6@HIST1H3A,p6@HIST1H3B,p6@HIST1H3C,p6@HIST1H3D,p6@HIST1H3E,p6@HIST1H3F,p6@HIST1H3G,p6@HIST1H3I,p6@HIST1H3J,p7@HIST1H3H | |short_description=p6@HIST1H3A,p6@HIST1H3B,p6@HIST1H3C,p6@HIST1H3D,p6@HIST1H3E,p6@HIST1H3F,p6@HIST1H3G,p6@HIST1H3I,p6@HIST1H3J,p7@HIST1H3H | ||
}} | }} |
Latest revision as of 11:09, 17 September 2015
Short description: | p6@HIST1H3A, p6@HIST1H3B, p6@HIST1H3C, p6@HIST1H3D, p6@HIST1H3E, p6@HIST1H3F, p6@HIST1H3G, p6@HIST1H3I, p6@HIST1H3J, p7@HIST1H3H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HIST1H3A_5end, CAGE_peak_6_at_HIST1H3B_5end, CAGE_peak_6_at_HIST1H3C_5end, CAGE_peak_6_at_HIST1H3D_5end, CAGE_peak_6_at_HIST1H3E_5end, CAGE_peak_6_at_HIST1H3F_5end, CAGE_peak_6_at_HIST1H3G_5end, CAGE_peak_6_at_HIST1H3I_5end, CAGE_peak_6_at_HIST1H3J_5end, CAGE_peak_7_at_HIST1H3H_5end |
Coexpression cluster: | C241_Reticulocytes_chronic_Tracheal_Hodgkin_Endothelial_Hair_thymus |
Association with transcript: | -5bp_to_ENST00000369163, NM_003536_5end |
EntrezGene: | 8350,8351,8352,8353,8354,8355,8356,8357,8358,8968 |
HGNC: | 4767, 4768, 4769, 4771, 4772, 4773, 4774, 4775, 4776&submit=Submit 4766, 4767, 4768, 4769, 4771, 4772, 4773, 4774, 4775, 4776 |
UniProt: | P68431 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.05e-08 | 53 |
common lymphoid progenitor | 1.05e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.89e-08 | 52 |
epithelial cell | 4.52e-08 | 253 |
embryonic cell | 6.22e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.43e-21 | 51 |
immune system cancer | 4.43e-21 | 51 |
cancer | 6.28e-21 | 235 |
disease of cellular proliferation | 1.74e-19 | 239 |
leukemia | 5.20e-17 | 39 |
myeloid leukemia | 5.56e-13 | 31 |
organ system cancer | 6.10e-12 | 137 |
cell type cancer | 4.41e-07 | 143 |