FFCP PHASE1:Hg19::chr6:45322890..45322895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:45322890..45322895,+ | |||
|coexpression_cluster_id=C77 | |coexpression_cluster_id=C77 | ||
|description=CAGE_peak_at_chr6:45322890..45322895,+ | |description=CAGE_peak_at_chr6:45322890..45322895,+ | ||
|id=chr6:45322890..45322895,+ | |id=chr6:45322890..45322895,+ | ||
|ontology_enrichment_celltype=CL:0000128!1.68e-24!7;CL:0000126!1.68e-24!7;CL:0000127!1.68e-24!7;CL:0002453!1.68e-24!7;CL:0000064!7.94e-16!3;CL:0005012!7.94e-16!3;CL:0000067!7.94e-16!3;CL:0002304!7.94e-16!3;CL:0002605!1.36e-15!3;CL:0000243!9.99e-10!15;CL:0000125!9.99e-10!15;CL:0000030!9.99e-10!15;CL:0000339!9.99e-10!15;CL:0000095!1.23e-08!17;CL:0000123!1.23e-08!17;CL:0002603!3.49e-07!3 | |ontology_enrichment_celltype=CL:0000128!1.68e-24!7;CL:0000126!1.68e-24!7;CL:0000127!1.68e-24!7;CL:0002453!1.68e-24!7;CL:0000064!7.94e-16!3;CL:0005012!7.94e-16!3;CL:0000067!7.94e-16!3;CL:0002304!7.94e-16!3;CL:0002605!1.36e-15!3;CL:0000243!9.99e-10!15;CL:0000125!9.99e-10!15;CL:0000030!9.99e-10!15;CL:0000339!9.99e-10!15;CL:0000095!1.23e-08!17;CL:0000123!1.23e-08!17;CL:0002603!3.49e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000062;2.91e-40;9!CL:0000064;1.96e-14;3!CL:0000067;1.96e-14;3!CL:0005012;1.96e-14;3!CL:0002605;1.96e-14;3!CL:0002304;1.96e-14;3!CL:0000128;6.21e-07;7!CL:0000126;6.21e-07;7!CL:0000127;6.21e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,3.85e-33,11;CL:0000375,3.85e-33,11;CL:0000335,3.85e-33,11;CL:0000064,1.83e-14,3;CL:0000067,1.83e-14,3;CL:0005012,1.83e-14,3;CL:0002304,1.83e-14,3;CL:0002605,2.09e-14,3;CL:0000128,6.39e-07,7;CL:0000126,6.39e-07,7;CL:0000127,6.39e-07,7;CL:0002453,6.39e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000335;3.85e-33;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!7.94e-16!3;UBERON:0001775!7.94e-16!3;UBERON:0000488!5.49e-12!4;UBERON:0003075!4.56e-09!86;UBERON:0007284!4.56e-09!86;UBERON:0002346!1.57e-08!90;UBERON:0000970!3.27e-08!20;UBERON:0002203!3.97e-08!6;UBERON:0001768!3.97e-08!6;UBERON:0002104!8.65e-08!21;UBERON:0007625!1.75e-07!11;UBERON:0003056!2.99e-07!61;UBERON:0000020!4.69e-07!23;UBERON:0001032!9.81e-07!24;UBERON:0004456!9.81e-07!24 | |ontology_enrichment_uberon=UBERON:0001778!7.94e-16!3;UBERON:0001775!7.94e-16!3;UBERON:0000488!5.49e-12!4;UBERON:0003075!4.56e-09!86;UBERON:0007284!4.56e-09!86;UBERON:0002346!1.57e-08!90;UBERON:0000970!3.27e-08!20;UBERON:0002203!3.97e-08!6;UBERON:0001768!3.97e-08!6;UBERON:0002104!8.65e-08!21;UBERON:0007625!1.75e-07!11;UBERON:0003056!2.99e-07!61;UBERON:0000020!4.69e-07!23;UBERON:0001032!9.81e-07!24;UBERON:0004456!9.81e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001474;1.20e-20;18!UBERON:0004765;1.41e-14;26!UBERON:0001778;1.96e-14;3!UBERON:0001775;1.96e-14;3!UBERON:0000488;3.60e-11;4!UBERON:0001434;8.18e-11;36!UBERON:0002203;7.01e-08;6!UBERON:0001768;7.01e-08;6!UBERON:0002200;7.01e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.83e-14,3;UBERON:0001775,1.83e-14,3;UBERON:0000488,3.42e-11,4;UBERON:0002203,6.78e-08,6;UBERON:0001768,6.78e-08,6;UBERON:0002200,6.78e-08,6 | |||
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|short_description=p@chr6:45322890..45322895,+ | |short_description=p@chr6:45322890..45322895,+ | ||
}} | }} |
Latest revision as of 02:00, 31 July 2015
Short description: | p@chr6:45322890..45322895, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:45322890..45322895, + |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 3.85e-33 | 11 |
osteoprogenitor cell | 3.85e-33 | 11 |
mesenchyme condensation cell | 3.85e-33 | 11 |
ciliated cell | 1.83e-14 | 3 |
ciliated epithelial cell | 1.83e-14 | 3 |
multi-ciliated epithelial cell | 1.83e-14 | 3 |
non-pigmented ciliary epithelial cell | 1.83e-14 | 3 |
astrocyte of the cerebral cortex | 2.09e-14 | 3 |
oligodendrocyte | 6.39e-07 | 7 |
macroglial cell | 6.39e-07 | 7 |
astrocyte | 6.39e-07 | 7 |
oligodendrocyte precursor cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.83e-14 | 3 |
ciliary body | 1.83e-14 | 3 |
atypical epithelium | 3.42e-11 | 4 |
vasculature of eye | 6.78e-08 | 6 |
uvea | 6.78e-08 | 6 |
vasculature of head | 6.78e-08 | 6 |