FFCP PHASE1:Hg19::chr19:45451955..45451977,+: Difference between revisions
From FANTOM5_SSTAR
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|id=chr19:45451955..45451977,+
|short_description=p5@APOC2
|description=CAGE_peak_5_at_APOC2_5end
|association_with_transcript=-450bp_to_AF113884_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=344 | |EntrezGene=344 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=609 | |HGNC=609 | ||
|TSSclassifier=strong | |||
|UniProt=P02655 | |UniProt=P02655 | ||
|association_with_transcript=-450bp_to_AF113884_5end | |||
|cluster_id=chr19:45451955..45451977,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_5_at_APOC2_5end | |||
|id=chr19:45451955..45451977,+ | |||
|ontology_enrichment_celltype=CL:0000453!4.20e-15!5;CL:0000181!3.40e-14!12;CL:0000417!3.40e-14!12;CL:0000668!3.40e-14!12;CL:0000414!3.40e-14!12;CL:0000412!3.40e-14!12;CL:0000182!3.40e-14!12;CL:0000990!1.94e-08!8;CL:0000763!3.45e-07!112;CL:0000049!3.45e-07!112;CL:0000451!6.47e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.23e-15;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.23e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.62e-08;11!UBERON:0009497;3.65e-07;13 | |||
|ontology_enrichment_disease=DOID:8692!1.16e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.75e-15!19;UBERON:0006925!1.75e-15!19;UBERON:0008836!1.75e-15!19;UBERON:0008835!3.44e-13!22;UBERON:0003894!3.44e-13!22;UBERON:0009854!1.47e-12!23;UBERON:0007499!1.90e-11!25;UBERON:0009497!1.90e-11!25;UBERON:0000015!1.90e-11!25;UBERON:0002423!1.90e-11!25;UBERON:0006235!1.90e-11!25;UBERON:0004161!1.90e-11!25;UBERON:0005057!5.89e-11!26;UBERON:0009856!5.89e-11!26;UBERON:0002365!5.61e-09!31;UBERON:0002330!5.61e-09!31;UBERON:0002368!8.38e-08!35;UBERON:0005383!6.47e-07!3;UBERON:0005382!6.47e-07!3;UBERON:0005172!6.57e-07!55;UBERON:0005173!6.57e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.88e-26;19!UBERON:0006925;1.88e-26;19!UBERON:0002423;3.62e-20;25!UBERON:0002365;2.90e-16;31!UBERON:0002330;2.90e-16;31!UBERON:0002368;4.33e-14;33!UBERON:0000949;2.87e-10;43!UBERON:0005172;1.80e-07;52!UBERON:0005173;1.80e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-26,19;UBERON:0006925,1.88e-26,19;UBERON:0008836,1.88e-26,19;UBERON:0008835,6.97e-23,22;UBERON:0003894,6.97e-23,22;UBERON:0009854,6.71e-22,23;UBERON:0007499,3.62e-20,25;UBERON:0009497,3.62e-20,25;UBERON:0000015,3.62e-20,25;UBERON:0002423,3.62e-20,25;UBERON:0006235,3.62e-20,25;UBERON:0004161,3.62e-20,25;UBERON:0009856,2.11e-19,26;UBERON:0002365,2.63e-16,31;UBERON:0002330,2.63e-16,31;UBERON:0002368,1.83e-14,35;UBERON:0000949,2.79e-11,45;UBERON:0003929,2.04e-09,54;UBERON:0005172,2.04e-09,54;UBERON:0005173,2.04e-09,54;UBERON:0002530,1.26e-08,59;UBERON:0002417,1.76e-08,60;UBERON:0000916,1.76e-08,60 | |||
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|short_description=p5@APOC2 | |||
}} | }} |
Latest revision as of 15:09, 18 September 2015
Short description: | p5@APOC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APOC2_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | -450bp_to_AF113884_5end |
EntrezGene: | APOC2 |
HGNC: | 609 |
UniProt: | P02655 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.23e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.88e-26 | 19 |
digestive gland | 1.88e-26 | 19 |
liver bud | 1.88e-26 | 19 |
hepatic diverticulum | 6.97e-23 | 22 |
liver primordium | 6.97e-23 | 22 |
digestive tract diverticulum | 6.71e-22 | 23 |
epithelial sac | 3.62e-20 | 25 |
epithelium of foregut-midgut junction | 3.62e-20 | 25 |
anatomical boundary | 3.62e-20 | 25 |
hepatobiliary system | 3.62e-20 | 25 |
foregut-midgut junction | 3.62e-20 | 25 |
septum transversum | 3.62e-20 | 25 |
sac | 2.11e-19 | 26 |
exocrine gland | 2.63e-16 | 31 |
exocrine system | 2.63e-16 | 31 |
endocrine gland | 1.83e-14 | 35 |
endocrine system | 2.79e-11 | 45 |
gut epithelium | 2.04e-09 | 54 |
abdomen element | 2.04e-09 | 54 |
abdominal segment element | 2.04e-09 | 54 |
gland | 1.26e-08 | 59 |
abdominal segment of trunk | 1.76e-08 | 60 |
abdomen | 1.76e-08 | 60 |