FFCP PHASE1:Hg19::chr8:29605842..29605856,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000523123,uc003xho.2,uc003xhp.2_5end | |association_with_transcript=1bp_to_ENST00000523123,uc003xho.2,uc003xhp.2_5end | ||
|cluster_id=chr8:29605842..29605856,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_1_at_ENST00000523123_5end,CAGE_peak_1_at_uc003xho.2_5end,CAGE_peak_1_at_uc003xhp.2_5end | |description=CAGE_peak_1_at_ENST00000523123_5end,CAGE_peak_1_at_uc003xho.2_5end,CAGE_peak_1_at_uc003xhp.2_5end | ||
|id=chr8:29605842..29605856,+ | |id=chr8:29605842..29605856,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.44e-27!10;CL:0000541!1.44e-27!10;CL:0000147!1.98e-19!14;CL:0002619!5.22e-18!3;CL:0002567!5.52e-18!3;CL:0000710!2.57e-13!20;CL:0000075!1.30e-09!27;CL:0002087!3.37e-08!119;CL:0002031!9.66e-08!124;CL:0002077!1.08e-07!33;CL:0002566!3.13e-07!1;CL:0002194!8.49e-07!63;CL:0000576!8.49e-07!63;CL:0000040!8.49e-07!63;CL:0000559!8.49e-07!63 | |ontology_enrichment_celltype=CL:0000148!1.44e-27!10;CL:0000541!1.44e-27!10;CL:0000147!1.98e-19!14;CL:0002619!5.22e-18!3;CL:0002567!5.52e-18!3;CL:0000710!2.57e-13!20;CL:0000075!1.30e-09!27;CL:0002087!3.37e-08!119;CL:0002031!9.66e-08!124;CL:0002077!1.08e-07!33;CL:0002566!3.13e-07!1;CL:0002194!8.49e-07!63;CL:0000576!8.49e-07!63;CL:0000040!8.49e-07!63;CL:0000559!8.49e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.51e-87;10!CL:0000147;1.48e-62;14!CL:0002619;2.38e-54;3!CL:0002567;2.86e-54;3!CL:0000710;8.69e-44;20!CL:0000075;2.05e-32;27!CL:0002077;1.03e-22;34!CL:0002566;1.08e-19;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.51e-87,10;CL:0000541,1.51e-87,10;CL:0000147,1.48e-62,14;CL:0002619,2.17e-54,3;CL:0002567,2.61e-54,3;CL:0000710,8.69e-44,20;CL:0000075,2.05e-32,27;CL:0002077,1.03e-25,34;CL:0000333,2.71e-20,41;CL:0002566,1.08e-19,1;CL:0000133,3.12e-14,59;CL:0000221,1.12e-11,72 | |||
|ontology_enrichment_development_v019=CL:0000133;6.10e-08;59 | |||
|ontology_enrichment_disease=DOID:1909!3.17e-12!2;DOID:0060060!5.57e-07!1;DOID:0060061!5.57e-07!1;DOID:8691!5.57e-07!1 | |ontology_enrichment_disease=DOID:1909!3.17e-12!2;DOID:0060060!5.57e-07!1;DOID:0060061!5.57e-07!1;DOID:8691!5.57e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1909;3.42e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002372!6.60e-07!1;UBERON:0001961!6.60e-07!1;UBERON:0001744!6.60e-07!1;UBERON:0001735!6.60e-07!1 | |ontology_enrichment_uberon=UBERON:0002372!6.60e-07!1;UBERON:0001961!6.60e-07!1;UBERON:0001744!6.60e-07!1;UBERON:0001735!6.60e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,2.46307021663917,11.6601719766833,4.63636021741536,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,12.8265746470181,9.54971063895694,10.5495702489042,1.71072446022705,2.05654985406647,7.20823338825402,13.7196687662678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.740872583160463,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,2.46307021663917,11.6601719766833,4.63636021741536,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,12.8265746470181,9.54971063895694,10.5495702489042,1.71072446022705,2.05654985406647,7.20823338825402,13.7196687662678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.740872583160463,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000523123,p1@uc003xho.2,p1@uc003xhp.2 | |short_description=p1@ENST00000523123,p1@uc003xho.2,p1@uc003xhp.2 | ||
}} | }} |
Latest revision as of 17:48, 31 July 2015
Short description: | p1@ENST00000523123, p1@uc003xho.2, p1@uc003xhp.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000523123_5end, CAGE_peak_1_at_uc003xho.2_5end, CAGE_peak_1_at_uc003xhp.2_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 1bp_to_ENST00000523123, uc003xho.2, uc003xhp.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.51e-87 | 10 |
melanoblast | 1.51e-87 | 10 |
pigment cell | 1.48e-62 | 14 |
adult endothelial progenitor cell | 2.17e-54 | 3 |
light melanocyte | 2.61e-54 | 3 |
neurecto-epithelial cell | 8.69e-44 | 20 |
columnar/cuboidal epithelial cell | 2.05e-32 | 27 |
ecto-epithelial cell | 1.03e-25 | 34 |
migratory neural crest cell | 2.71e-20 | 41 |
dark melanocyte | 1.08e-19 | 1 |
neurectodermal cell | 3.12e-14 | 59 |
ectodermal cell | 1.12e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.58e-10 | 2 |